Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC007529.1-201ENST00000418574 2178 ntBASIC6.41□□□□□ -1.38
PCDHGC3Q9UN70 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGC3Q9UN70 TTC41P-205ENST00000551270 3963 ntBASIC6.41□□□□□ -1.38
PCDHGC3Q9UN70 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PCDHGC3Q9UN70 DDX10P1-201ENST00000448545 1933 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AL606537.1-201ENST00000607258 2011 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 RN7SKP292-201ENST00000365522 317 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 Y_RNA.480-201ENST00000384364 102 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 MIR517A-201ENST00000385001 87 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AKR1B10P1-201ENST00000425765 942 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 HMGB3P24-201ENST00000433260 622 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 RPL23AP33-201ENST00000442301 452 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC010655.1-201ENST00000449336 292 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC243772.1-201ENST00000451620 410 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 SDC4P-201ENST00000453285 601 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC008481.1-201ENST00000463278 396 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC124945.1-201ENST00000485133 188 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 HMGB1P35-201ENST00000503360 598 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC006499.3-201ENST00000506077 748 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC092436.3-201ENST00000511788 257 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 HSD3BP3-201ENST00000514706 994 ntBASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHGC3Q9UN70 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 PABPC1P7-201ENST00000413177 1513 ntBASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHGC3Q9UN70 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 EIF2AP4-201ENST00000424793 1781 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 Y_RNA.126-201ENST00000363382 111 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU6-770P-201ENST00000363929 105 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU4-50P-201ENST00000364361 141 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU6-596P-201ENST00000365395 98 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU6-398P-201ENST00000384143 109 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU11-4P-201ENST00000391149 133 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 GCNT1P4-201ENST00000404096 329 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AL138885.1-201ENST00000405921 675 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RPS4XP7-201ENST00000406274 780 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 ELOCP20-201ENST00000422460 345 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RPS12P5-201ENST00000423449 371 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 RNU7-138P-201ENST00000459479 64 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 FO393415.2-201ENST00000480085 343 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 GAPDHP62-201ENST00000515313 990 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC069113.1-201ENST00000517763 267 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 MIR3154-201ENST00000577829 84 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 AL355812.1-201ENST00000603215 216 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 HMGB1P50-201ENST00000605814 607 ntBASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHGC3Q9UN70 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms