Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC140479.6-201ENST00000633535 357 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 AL672167.1-204ENST00000641875 3017 ntBASIC5.03□□□□□ -1.6
VTA1Q9NP79 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTA1Q9NP79 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
VTA1Q9NP79 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VTA1Q9NP79 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VTA1Q9NP79 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AP002001.2-201ENST00000529025 1469 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 NEAT1-202ENST00000501122 22743 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VTA1Q9NP79 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 MIR331-201ENST00000362302 94 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 SNORD82-201ENST00000365530 70 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 RNU6-259P-201ENST00000383999 107 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 RNU6-517P-201ENST00000384362 110 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 RPL31P1-201ENST00000398116 372 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 RNU6-248P-201ENST00000410720 107 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 RPL31P45-201ENST00000419532 356 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL590233.1-201ENST00000430017 456 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AP000542.1-201ENST00000448473 371 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC022795.1-201ENST00000473808 480 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC087385.1-201ENST00000475062 312 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 RPL37P25-201ENST00000507308 276 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VTA1Q9NP79 RN7SKP277-201ENST00000516895 283 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 TRAV8-5-201ENST00000537369 341 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL161713.1-201ENST00000555538 145 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 CENPUP2-201ENST00000555897 1186 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC136619.2-201ENST00000563361 631 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 RN7SL176P-201ENST00000580352 264 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 RN7SL435P-201ENST00000584418 282 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC067852.4-201ENST00000590314 478 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC079587.1-201ENST00000603846 277 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC090578.1-201ENST00000604955 591 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC006566.1-201ENST00000608943 513 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC024941.1-201ENST00000612250 334 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 MIR492-201ENST00000638676 116 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 AC099654.12-201ENST00000639868 649 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
VTA1Q9NP79 AL049780.3-201ENST00000624612 1583 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 PABPC1P7-201ENST00000413177 1513 ntBASIC5.02□□□□□ -1.61
VTA1Q9NP79 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.02□□□□□ -1.61
VTA1Q9NP79 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC126323.6-202ENST00000568092 3511 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 FRG1BP-201ENST00000278882 761 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 MIR383-201ENST00000362257 73 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RNVU1-3-201ENST00000364313 161 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RNU6-744P-201ENST00000365557 107 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 RNU6-1316P-201ENST00000384242 108 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 EIF4A1P3-201ENST00000411521 244 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 UBE2V1P10-201ENST00000414685 269 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL139095.3-201ENST00000419672 1203 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VTA1Q9NP79 EZH2P1-201ENST00000431167 291 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC244505.5-201ENST00000443639 207 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 MTND1P1-201ENST00000445453 368 ntBASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.01□□□□□ -1.61
VTA1Q9NP79 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms