Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL138478.1-201ENST00000612252 832 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 AC006065.5-201ENST00000623427 349 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 AP003355.3-201ENST00000623465 114 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.21□□□□□ -1.74
NEK1Q96PY6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NEK1Q96PY6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK1Q96PY6 AC090337.1-201ENST00000579651 2074 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK1Q96PY6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
NEK1Q96PY6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK1Q96PY6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 AC099786.3-201ENST00000565735 1410 ntBASIC4.21□□□□□ -1.74
NEK1Q96PY6 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEK1Q96PY6 NMD3P1-201ENST00000439704 1488 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 SAGE4P-201ENST00000442271 3381 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NEK1Q96PY6 RNU4-68P-201ENST00000364314 141 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 RNU6-328P-201ENST00000390887 106 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 PTMAP5-201ENST00000393073 333 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL136116.1-201ENST00000403591 381 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 BTBD10P2-201ENST00000404779 676 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 RN7SKP53-201ENST00000411337 315 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 RPS29P4-201ENST00000414733 161 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 RPL36P19-201ENST00000430744 301 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 NANOGP2-201ENST00000435391 727 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 HMGN2P21-201ENST00000447764 270 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 PRDX3P3-201ENST00000447765 522 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 COX6CP18-201ENST00000448769 222 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 Z99714.1-201ENST00000450463 807 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC005410.1-202ENST00000460347 485 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 PLGLA-201ENST00000465668 449 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 RN7SL594P-201ENST00000470590 287 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 RNU6-885P-201ENST00000516607 104 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 MTND2P26-201ENST00000528255 1029 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC026333.2-201ENST00000542164 106 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 GTF2IP22-201ENST00000554443 182 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 ZNF415P1-201ENST00000582279 1166 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC022069.1-201ENST00000582910 658 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC015688.2-201ENST00000584523 262 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC020914.6-201ENST00000594327 272 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 VN1R83P-201ENST00000595685 445 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC010591.1-201ENST00000603941 649 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL450336.1-201ENST00000605180 586 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 RNA5SP108-201ENST00000605921 117 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 U3.45-201ENST00000607547 219 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC105227.2-201ENST00000615075 605 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.2□□□□□ -1.74
NEK1Q96PY6 AC068620.4-201ENST00000636730 1182 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 LINC02211-204ENST00000642024 1070 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AF127577.6-201ENST00000623352 2191 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
NEK1Q96PY6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NEK1Q96PY6 RNU6-582P-201ENST00000362989 107 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 RNU6-839P-201ENST00000363347 108 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 snoZ40.1-201ENST00000364540 72 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 RNU6-356P-201ENST00000384140 107 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 ANAPC10P1-201ENST00000395991 556 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AL136310.1-201ENST00000404926 654 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 SSR1P2-201ENST00000415208 787 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC017079.2-201ENST00000416102 485 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 DPRXP1-201ENST00000426312 460 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 AL365396.1-201ENST00000430854 671 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC079776.3-201ENST00000450665 370 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 NDUFA5P7-201ENST00000452914 242 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 HMGN3P1-201ENST00000453847 193 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 CFTRP1-201ENST00000456646 183 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC023598.1-201ENST00000472521 361 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 RPL23AP44-201ENST00000482216 473 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 FCF1P3-201ENST00000496394 590 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC113347.3-201ENST00000509113 148 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 RNA5SP135-201ENST00000517019 125 ntBASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.19□□□□□ -1.74
NEK1Q96PY6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms