Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TUG1_2.1-201ENST00000614234 87 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC119674.1-204ENST00000641348 1343 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
HLA-CQ95604 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 AC011455.2-201ENST00000599320 3336 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
HLA-CQ95604 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HLA-CQ95604 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC009237.3-203ENST00000442128 3551 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC005225.5-201ENST00000623547 2225 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 Y_RNA.26-201ENST00000362539 101 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 RNVU1-3-201ENST00000364313 161 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 RNU6-378P-201ENST00000384324 107 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 RNU2-21P-201ENST00000410368 188 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 BX276092.3-201ENST00000424182 230 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL139148.1-201ENST00000427122 680 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL162389.1-201ENST00000449233 177 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL138752.1-201ENST00000452964 351 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 RNU4-71P-201ENST00000516258 113 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 IGLVIV-53-201ENST00000520107 367 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AC018442.3-201ENST00000523025 183 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-CQ95604 AC068446.3-201ENST00000555285 382 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-CQ95604 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 RPS29P30-201ENST00000600975 111 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL158032.1-201ENST00000605401 106 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AC006023.2-201ENST00000609916 167 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 RN7SL544P-201ENST00000617232 284 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 MIR6837-201ENST00000620884 64 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 RN7SL763P-201ENST00000620922 284 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-CQ95604 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.37□□□□□ -1.39
HLA-CQ95604 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-CQ95604 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 AL606537.1-201ENST00000607258 2011 ntBASIC6.37□□□□□ -1.39
HLA-CQ95604 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-CQ95604 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
HLA-CQ95604 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-CQ95604 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-CQ95604 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-CQ95604 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.36□□□□□ -1.39
HLA-CQ95604 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 RN7SKP103-201ENST00000363848 320 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 Y_RNA.291-201ENST00000364886 113 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 RNU6-806P-201ENST00000365147 105 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 SNORD113-1-201ENST00000365321 69 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 PPIAP9-201ENST00000403866 498 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC016739.1-201ENST00000405359 345 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 RPS4XP7-201ENST00000406274 780 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.36□□□□□ -1.39
HLA-CQ95604 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-CQ95604 EEF1A1P1-201ENST00000447052 739 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC091180.1-201ENST00000462104 372 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-CQ95604 RNU6-677P-201ENST00000516914 101 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 RNU6-1212P-201ENST00000517023 104 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC103783.1-201ENST00000520506 373 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-CQ95604 AC009643.1-201ENST00000532030 391 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms