Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AC041039.1-201ENST00000485656 536 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC093278.1-201ENST00000494700 600 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC034159.1-201ENST00000513885 583 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 WISP1-OT1-201ENST00000602893 642 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC011451.2-201ENST00000604303 598 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AL031176.1-201ENST00000604554 466 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC107214.2-201ENST00000608204 634 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC068831.8-201ENST00000620171 435 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AL445363.3-201ENST00000623080 671 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AP003399.1-201ENST00000637534 361 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 CR381670.1-201ENST00000624291 1693 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC012020.1-201ENST00000624541 1728 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 AC092435.4-201ENST00000623012 4159 ntBASIC5.11□□□□□ -1.59
STAG1Q8WVM7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
STAG1Q8WVM7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 HDGFP1-201ENST00000405943 252 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC245052.5-201ENST00000416320 649 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC244098.2-201ENST00000422068 99 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 RPL37P21-201ENST00000435890 276 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC108734.1-201ENST00000439549 399 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 NUTF2P7-201ENST00000453086 375 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 UQCRHP4-201ENST00000471686 272 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 RPL35P6-201ENST00000490024 372 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 RPL5P23-201ENST00000496040 868 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC116347.2-201ENST00000514912 523 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 MTCO1P49-201ENST00000523429 802 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC004853.1-201ENST00000604902 698 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC097468.3-201ENST00000607956 456 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AL356266.1-201ENST00000623311 483 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 AC079597.1-201ENST00000624306 508 ntBASIC5.1□□□□□ -1.59
STAG1Q8WVM7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
STAG1Q8WVM7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 AL049780.3-201ENST00000624612 1583 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 ZNF833P-201ENST00000424938 1494 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 AL513185.3-201ENST00000433335 1300 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
STAG1Q8WVM7 RNU6-989P-201ENST00000362756 107 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 RNU4-40P-201ENST00000364351 143 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 RNU6-660P-201ENST00000364566 109 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 RNU6-744P-201ENST00000365557 107 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 RNU6-1316P-201ENST00000384242 108 ntBASIC5.09□□□□□ -1.59
STAG1Q8WVM7 SNORD66.1-201ENST00000391230 76 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms