Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGA2P52926 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGA2P52926 SNORA40.12-201ENST00000516329 111 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 RNA5SP43-201ENST00000516559 110 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AC009812.2-201ENST00000517657 457 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.45□□□□□ -1.7
HMGA2P52926 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 KCTD9P6-201ENST00000522306 950 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.45□□□□□ -1.7
HMGA2P52926 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 FKBP1BP1-201ENST00000553366 325 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 AC011447.4-201ENST00000587562 111 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 BMS1P7-201ENST00000602440 1052 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AP001330.4-201ENST00000604350 154 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AC115621.1-201ENST00000604653 858 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 APOOP1-201ENST00000604695 592 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 BNIP3P4-201ENST00000604946 565 ntBASIC4.45□□□□□ -1.7
HMGA2P52926 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGA2P52926 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGA2P52926 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGA2P52926 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HMGA2P52926 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGA2P52926 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGA2P52926 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 AL445487.1-201ENST00000415694 1580 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HMGA2P52926 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 ENSAP3-201ENST00000312710 333 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 Y_RNA.5-201ENST00000362334 102 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 Y_RNA.187-201ENST00000363918 113 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA2P52926 SNORD96B-201ENST00000386148 79 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 NPM1P38-201ENST00000403835 865 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA2P52926 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC109583.1-201ENST00000432156 268 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 RPL21P23-201ENST00000446654 460 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AL136038.1-201ENST00000497246 351 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC048346.1-201ENST00000510247 144 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AC021146.3-201ENST00000511911 260 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 RNA5SP392-201ENST00000516905 112 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 SUB1P1-201ENST00000524415 382 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AP003181.2-201ENST00000528941 181 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AP002404.1-201ENST00000532005 451 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 AL137100.2-201ENST00000555786 315 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA2P52926 ATP5J2P6-201ENST00000565203 266 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC053481.3-201ENST00000577881 843 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 MIR3614-201ENST00000581261 86 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC130352.1-201ENST00000602979 661 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGA2P52926 AC092650.2-201ENST00000619984 902 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AL353662.3-201ENST00000625131 237 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 AC093591.2-201ENST00000565254 3843 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 AL121950.1-201ENST00000624993 2077 ntBASIC4.44□□□□□ -1.7
HMGA2P52926 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGA2P52926 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGA2P52926 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGA2P52926 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGA2P52926 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMGA2P52926 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms