Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU2-17P-201ENST00000410290 190 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AL158825.1-201ENST00000414735 521 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC234782.4-201ENST00000417646 1048 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA9P31269 AL121882.1-201ENST00000422893 417 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 PTP4A1P3-201ENST00000433661 420 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AP000949.1-201ENST00000438328 629 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC069540.1-201ENST00000446320 988 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA9P31269 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA9P31269 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXA9P31269 HMGN2P16-201ENST00000456802 261 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC079148.1-201ENST00000565944 819 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.31□□□□□ -1.88
HOXA9P31269 AL365400.2-201ENST00000605604 902 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC110792.4-201ENST00000609843 298 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AC105227.2-201ENST00000615075 605 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 AL163051.2-201ENST00000618976 735 ntBASIC3.31□□□□□ -1.88
HOXA9P31269 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.31□□□□□ -1.88
HOXA9P31269 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HOXA9P31269 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HOXA9P31269 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA9P31269 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA9P31269 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 SNORD15B-201ENST00000384714 146 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 RNU4-27P-201ENST00000410889 139 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC023128.2-201ENST00000420880 1223 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 ETF1P3-201ENST00000430422 1160 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 CST9LP2-201ENST00000437612 320 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA9P31269 ARPC3P2-201ENST00000457786 533 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AC078857.1-201ENST00000469870 667 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 RPS27AP1-201ENST00000475545 471 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 TRBV8-2-201ENST00000475637 270 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AC068724.1-201ENST00000487100 792 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC133963.2-201ENST00000513686 578 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HOXA9P31269 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 MTND1P36-201ENST00000522384 936 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 OR4R2P-201ENST00000530815 597 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC034105.3-201ENST00000565294 442 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 MIR4474-201ENST00000579189 78 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXA9P31269 AL033523.1-201ENST00000605153 153 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AL450489.1-201ENST00000612071 468 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXA9P31269 AC000403.1-201ENST00000613696 3585 ntBASIC3.3□□□□□ -1.88
HOXA9P31269 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HOXA9P31269 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXA9P31269 MTCO1P24-201ENST00000515438 1558 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXA9P31269 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 LINC01347-201ENST00000417964 355 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 USP9YP36-201ENST00000424581 829 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 VN1R42P-201ENST00000424651 344 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 FO393419.3-201ENST00000428741 282 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 VDAC1P3-201ENST00000434069 851 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXA9P31269 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 AC096992.1-201ENST00000459808 709 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXA9P31269 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 OSBPL9P3-201ENST00000534523 595 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 AL845331.3-202ENST00000562856 261 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 MTND4LP25-201ENST00000570218 163 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA9P31269 AC009948.4-201ENST00000604692 675 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXA9P31269 AC100793.4-201ENST00000613683 429 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
HOXA9P31269 FAM157B-203ENST00000639350 358 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms