Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ARL2BPP10-201ENST00000446487 531 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 EIF4A1P11-201ENST00000451239 222 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC092824.1-201ENST00000483524 576 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 RBBP4P6-201ENST00000508098 202 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFAP04085 MIR1273E-201ENST00000581165 102 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC020916.2-201ENST00000591242 360 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 DUSP12P1-201ENST00000612874 516 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PDGFAP04085 TUG1_2.1-201ENST00000614234 87 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AL138726.1-201ENST00000614873 333 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AC010378.1-201ENST00000619270 362 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFAP04085 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 MTCO1P24-201ENST00000515438 1558 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFAP04085 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AC006484.1-201ENST00000435086 1884 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 ADAM24P-201ENST00000398655 2101 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 AL451142.2-201ENST00000429076 2090 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC079753.1-201ENST00000623243 3868 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 RNA5SP132-201ENST00000364725 118 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 RNU6-310P-201ENST00000384655 107 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 Y_RNA.605-201ENST00000410577 105 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 BX682237.1-201ENST00000415016 335 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AL391219.1-201ENST00000422570 483 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL355433.1-201ENST00000422804 300 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 MTCYBP10-201ENST00000424905 650 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFAP04085 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFAP04085 MTCO3P45-201ENST00000443036 613 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL035666.1-201ENST00000446195 348 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC092967.1-201ENST00000449016 481 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL162389.1-201ENST00000449233 177 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFAP04085 BTF3P15-201ENST00000455606 336 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 MIR2053-201ENST00000459295 91 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 HMGB1P25-201ENST00000468402 607 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 COX6B1P2-201ENST00000489624 230 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.56□□□□□ -1.52
PDGFAP04085 RNA5SP228-201ENST00000516232 133 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 SNORA70.20-201ENST00000516848 126 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.56□□□□□ -1.52
PDGFAP04085 AP003385.6-201ENST00000531603 374 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.56□□□□□ -1.52
PDGFAP04085 AL117187.1-201ENST00000555482 181 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.56□□□□□ -1.52
PDGFAP04085 OR1F2P-201ENST00000570470 933 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 MIR3941-201ENST00000582572 103 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL670379.4-201ENST00000605279 254 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL136131.3-201ENST00000607600 188 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC009570.1-201ENST00000609599 745 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AC110801.1-201ENST00000623590 212 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 AL669831.3-213ENST00000636676 183 ntBASIC5.56□□□□□ -1.52
PDGFAP04085 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDGFAP04085 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.55□□□□□ -1.52
PDGFAP04085 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDGFAP04085 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
PDGFAP04085 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.55□□□□□ -1.52
PDGFAP04085 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms