Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AC023194.1-201ENST00000493084 308 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC073073.1-201ENST00000493920 463 ntBASIC4.96□□□□□ -1.62
CBX4O00257 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX4O00257 RPS4XP18-201ENST00000495480 763 ntBASIC4.96□□□□□ -1.62
CBX4O00257 FAM92A1P2-202ENST00000504766 877 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX4O00257 AC010587.1-201ENST00000505809 469 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.96□□□□□ -1.62
CBX4O00257 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX4O00257 Y_RNA.719-201ENST00000517156 106 ntBASIC4.96□□□□□ -1.62
CBX4O00257 RN7SKP234-201ENST00000517173 224 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC118273.2-201ENST00000532092 465 ntBASIC4.96□□□□□ -1.62
CBX4O00257 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.96□□□□□ -1.62
CBX4O00257 SNORA74C-1-201ENST00000580726 201 ntBASIC4.96□□□□□ -1.62
CBX4O00257 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 AC012507.3-201ENST00000603556 477 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC007363.1-201ENST00000604736 620 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AL355472.4-201ENST00000610233 626 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC007497.1-201ENST00000610421 561 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC083809.1-201ENST00000615051 472 ntBASIC4.96□□□□□ -1.62
CBX4O00257 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX4O00257 AC006338.1-201ENST00000618453 749 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC091953.2-201ENST00000623979 160 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC091905.1-201ENST00000624400 311 ntBASIC4.96□□□□□ -1.62
CBX4O00257 CR381572.2-201ENST00000624852 397 ntBASIC4.96□□□□□ -1.62
CBX4O00257 AC019226.1-201ENST00000625666 515 ntBASIC4.96□□□□□ -1.62
CBX4O00257 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CBX4O00257 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX4O00257 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.96□□□□□ -1.62
CBX4O00257 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CBX4O00257 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CBX4O00257 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CBX4O00257 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.96□□□□□ -1.62
CBX4O00257 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CBX4O00257 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CBX4O00257 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 AC009902.3-201ENST00000606235 2172 ntBASIC4.95□□□□□ -1.62
CBX4O00257 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 RNU5E-1-201ENST00000362477 120 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNU6-181P-201ENST00000363225 107 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNU6-1085P-201ENST00000363576 107 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNY1P12-201ENST00000364251 105 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNY3P14-201ENST00000384309 102 ntBASIC4.95□□□□□ -1.62
CBX4O00257 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CBX4O00257 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 RNA5SP113-201ENST00000410486 84 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AC114755.2-201ENST00000413520 361 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RPS12P5-201ENST00000423449 371 ntBASIC4.95□□□□□ -1.62
CBX4O00257 EZH2P1-201ENST00000431167 291 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX4O00257 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX4O00257 NEK4P1-201ENST00000433383 879 ntBASIC4.95□□□□□ -1.62
CBX4O00257 PTMAP3-201ENST00000447474 330 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AC132479.1-201ENST00000449160 144 ntBASIC4.95□□□□□ -1.62
CBX4O00257 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.95□□□□□ -1.62
CBX4O00257 RN7SL517P-201ENST00000462240 305 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNU6-27P-201ENST00000516146 107 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RNU6-445P-201ENST00000516949 107 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX4O00257 IGKV2D-36-201ENST00000518643 226 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AP001880.2-201ENST00000538233 448 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.95□□□□□ -1.62
CBX4O00257 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 AC068446.3-201ENST00000555285 382 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.95□□□□□ -1.62
CBX4O00257 MIR3118-1-201ENST00000581787 76 ntBASIC4.95□□□□□ -1.62
CBX4O00257 MIR4472-2-201ENST00000582069 67 ntBASIC4.95□□□□□ -1.62
CBX4O00257 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.95□□□□□ -1.62
CBX4O00257 AC008277.2-201ENST00000605196 797 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AL008729.2-201ENST00000606393 473 ntBASIC4.95□□□□□ -1.62
CBX4O00257 FAM27B-201ENST00000610601 213 ntBASIC4.95□□□□□ -1.62
CBX4O00257 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.95□□□□□ -1.62
CBX4O00257 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 AC009643.2-201ENST00000603543 1448 ntBASIC4.95□□□□□ -1.62
CBX4O00257 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 AL672167.1-205ENST00000641112 3080 ntBASIC4.95□□□□□ -1.62
CBX4O00257 SDAD1P1-202ENST00000524156 2051 ntBASIC4.95□□□□□ -1.62
CBX4O00257 AL359893.1-201ENST00000447628 1580 ntBASIC4.95□□□□□ -1.62
CBX4O00257 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CBX4O00257 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.95□□□□□ -1.62
CBX4O00257 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CBX4O00257 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms