Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC012065.4-201ENST00000602445 679 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AL009028.1-201ENST00000604895 802 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AC012557.2-201ENST00000605919 418 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AC090186.1-201ENST00000605991 572 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AC025594.3-201ENST00000613068 790 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AL158196.1-201ENST00000616786 434 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AC004009.2-201ENST00000623016 728 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 AL356473.1-201ENST00000406203 1408 ntBASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TBC1D3FA6NER0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC097504.1-201ENST00000515103 2415 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MIR372-201ENST00000362225 67 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 RNU5F-6P-201ENST00000362979 116 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 RNA5SP283-201ENST00000365604 119 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MTND4LP20-201ENST00000402379 270 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MTCYBP36-201ENST00000404146 440 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC109780.2-201ENST00000413467 845 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 UBTFL3-201ENST00000418934 1024 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AL389915.1-201ENST00000422463 466 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AL445669.1-201ENST00000426743 755 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 RPEP2-201ENST00000432149 701 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC122718.1-201ENST00000439448 744 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 FAM133DP-201ENST00000464802 691 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 RN7SL817P-201ENST00000480777 288 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AL132838.2-201ENST00000492041 314 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MTCO3P7-201ENST00000510008 774 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AL139174.1-201ENST00000531489 886 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC013828.2-201ENST00000532487 235 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC068587.4-201ENST00000533893 186 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MIR544B-201ENST00000582372 78 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC010201.1-201ENST00000605051 540 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MIR6867-201ENST00000610636 67 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 HULC.1-201ENST00000612720 240 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 AC025048.6-202ENST00000627667 438 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 MIR6715B-201ENST00000637172 77 ntBASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TBC1D3FA6NER0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 NUP58P1-201ENST00000502546 1738 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RNU1-20P-201ENST00000363314 162 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 SNORA70E-201ENST00000384492 135 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RNA5SP372-201ENST00000390836 115 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 MIR1911-201ENST00000410783 80 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AL356095.1-201ENST00000417217 199 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RPS27AP14-201ENST00000422868 454 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 PSMA6P3-201ENST00000428242 164 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 PSMA2P3-201ENST00000429685 675 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AL590233.1-201ENST00000430017 456 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RPL23AP46-201ENST00000438548 490 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RNU6-956P-201ENST00000458868 103 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 RPS29P19-201ENST00000479709 171 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 AC012158.1-204ENST00000483430 465 ntBASIC4.24□□□□□ -1.73
TBC1D3FA6NER0 HMGB1P36-201ENST00000487709 576 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms