Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 DYNLT3P2-201ENST00000442517 295 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 HLA-DPA3-207ENST00000454398 229 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AL353752.1-201ENST00000454946 260 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 RPL38P3-201ENST00000484463 213 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC068781.1-201ENST00000488231 618 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC114728.1-201ENST00000488289 483 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC026979.1-201ENST00000492525 396 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC096745.1-201ENST00000509945 370 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 CYCSP27-201ENST00000527643 293 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC007375.1-201ENST00000554513 578 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC007494.1-201ENST00000562293 760 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 Z98751.3-201ENST00000604447 521 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 SNHG22-203ENST00000617833 660 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AL589994.2-201ENST00000621124 579 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AP001784.1-201ENST00000624107 428 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 AC018628.1-201ENST00000624147 3819 ntBASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AP000547.3-204ENST00000588548 2523 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF402P-201ENST00000404435 3100 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-1062P-201ENST00000383908 107 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RNU6-293P-201ENST00000411259 106 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 HMGB3P24-201ENST00000433260 622 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RPL23AP50-201ENST00000434149 455 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AL445928.1-201ENST00000435545 222 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 CYCSP12-201ENST00000437729 300 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AL353662.1-201ENST00000439099 327 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 H3F3BP1-201ENST00000440551 403 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 OR1H1P-201ENST00000448731 937 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RPS27AP3-201ENST00000453803 454 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC245028.2-201ENST00000458673 253 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC087884.1-201ENST00000469738 328 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RPS23P3-201ENST00000470993 430 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RN7SKP238-201ENST00000516483 249 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 IGLVIV-53-201ENST00000520107 367 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 MIR6768-201ENST00000610734 72 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC109309.2-201ENST00000612597 332 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 EIF3FP1-201ENST00000613970 806 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC141273.2-201ENST00000618989 130 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 AC079753.1-201ENST00000623243 3868 ntBASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB11Q9Y5F2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDHB11Q9Y5F2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms