Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 ZNF33CP-201ENST00000432492 2030 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.68□□□□□ -1.66
COL20A1Q9P218 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL20A1Q9P218 AC015813.6-201ENST00000624409 5808 ntBASIC4.68□□□□□ -1.66
COL20A1Q9P218 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL20A1Q9P218 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL20A1Q9P218 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL20A1Q9P218 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 RNU1-15P-201ENST00000353977 144 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 Y_RNA.194-201ENST00000363985 102 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AL031679.1-201ENST00000400616 525 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC004987.3-201ENST00000413879 771 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 TPMTP2-201ENST00000414372 726 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 CYCSP46-201ENST00000423569 204 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 RPS4XP4-201ENST00000443195 763 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 SNRPGP9-201ENST00000456025 225 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 RNU6-956P-201ENST00000458868 103 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 PLGLA-201ENST00000465668 449 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC087312.1-201ENST00000471411 480 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC087385.1-201ENST00000475062 312 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC017015.1-201ENST00000477387 286 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC020593.1-201ENST00000507399 299 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 POU5F1P7-201ENST00000508759 541 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC024589.1-201ENST00000512207 263 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 IGLVIV-53-201ENST00000520107 367 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC100770.1-201ENST00000532310 322 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AL161713.1-201ENST00000555538 145 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 MIR5684-201ENST00000585074 65 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 AL357080.1-201ENST00000617394 239 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC098679.4-201ENST00000624241 654 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 AC025048.6-202ENST00000627667 438 ntBASIC4.67□□□□□ -1.66
COL20A1Q9P218 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL20A1Q9P218 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL20A1Q9P218 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
COL20A1Q9P218 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL20A1Q9P218 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL20A1Q9P218 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 PABPC1P9-201ENST00000426076 1612 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 SNORD116-4-201ENST00000384733 96 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 RPS24P12-201ENST00000402084 394 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 RN7SKP27-201ENST00000410684 333 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 RN7SKP142-201ENST00000411236 328 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC012065.2-201ENST00000421295 375 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 MTCO2P5-201ENST00000422621 426 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 RPS27AP14-201ENST00000422868 454 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 PSMA2P3-201ENST00000429685 675 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 PRELID3BP10-201ENST00000431957 584 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 LARP1BP3-201ENST00000437229 869 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 TRIM60P18-201ENST00000441518 828 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 HSPE1P28-201ENST00000443139 211 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 RPS11P1-201ENST00000451072 473 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 RPL38P1-201ENST00000460914 211 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC091564.1-201ENST00000464563 479 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 PABPC1P3-201ENST00000469174 459 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC109458.1-201ENST00000508858 316 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 HMGB1P19-201ENST00000517578 577 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC008694.2-201ENST00000517591 306 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC060788.1-201ENST00000521318 469 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 IFITM8P-201ENST00000522529 394 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
COL20A1Q9P218 AC063950.1-201ENST00000552036 308 ntBASIC4.66□□□□□ -1.66
COL20A1Q9P218 GTF2IP22-201ENST00000554443 182 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms