Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RNF39Q9H2S5 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 RNU6-78P-201ENST00000362897 107 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 RNU6-105P-201ENST00000363909 104 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 Y_RNA.198-201ENST00000364013 98 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 SNORD38C-201ENST00000384381 69 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 MIR575-201ENST00000385013 94 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 RPL21P67-201ENST00000402896 478 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 MIR1278-201ENST00000408753 81 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AC108075.1-201ENST00000424692 529 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 FTH1P6-201ENST00000430768 320 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 RN7SL456P-201ENST00000469290 295 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 UQCRHP4-201ENST00000471686 272 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 FAM30C-201ENST00000561158 410 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AL161798.1-201ENST00000604630 131 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AL450472.3-201ENST00000615578 367 ntBASIC8.01□□□□□ -1.13
RNF39Q9H2S5 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC8.01□□□□□ -1.13
RNF39Q9H2S5 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 DDX10P2-201ENST00000417796 2614 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC8□□□□□ -1.13
RNF39Q9H2S5 RNU6-1264P-201ENST00000383891 107 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 OR2AH1P-201ENST00000425717 928 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 AL354983.1-201ENST00000434580 906 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 RN7SL153P-201ENST00000486501 292 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 LINC01085-203ENST00000511195 326 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC8□□□□□ -1.13
RNF39Q9H2S5 AL135978.1-201ENST00000553618 1266 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8□□□□□ -1.13
RNF39Q9H2S5 AL355816.1-201ENST00000607951 118 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 AC006160.2-201ENST00000637708 154 ntBASIC8□□□□□ -1.13
RNF39Q9H2S5 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC8□□□□□ -1.13
RNF39Q9H2S5 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RNF39Q9H2S5 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8□□□□□ -1.13
RNF39Q9H2S5 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8□□□□□ -1.13
RNF39Q9H2S5 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RNU6-454P-201ENST00000364292 107 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RNU6-484P-201ENST00000384016 107 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms