Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC000111.3-201ENST00000433478 193 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 FAM103A2P-201ENST00000444122 354 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC013267.1-201ENST00000458227 267 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC013356.1-201ENST00000489027 564 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 FAM92A1P2-202ENST00000504766 877 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 NRBF2P1-201ENST00000587407 859 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 HMGN1P30-201ENST00000589286 268 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-87P-201ENST00000607561 108 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC007497.1-201ENST00000610421 561 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL161616.1-201ENST00000611867 286 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC000123.2-201ENST00000623124 461 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 MIR3688-2-201ENST00000636963 87 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL049780.3-201ENST00000624612 1583 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RNA5SP123-201ENST00000363244 119 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.256-201ENST00000364594 104 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-343P-201ENST00000364709 104 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.450-201ENST00000384198 113 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 SNORA68.2-201ENST00000391263 128 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 MIR1277-201ENST00000408536 78 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 COX6B1P1-201ENST00000415962 213 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL590139.1-201ENST00000416267 400 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC233728.2-201ENST00000425348 757 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ISCA1P6-201ENST00000427740 390 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL358934.1-201ENST00000432346 324 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ARPC3P1-201ENST00000437218 533 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL451074.3-201ENST00000437709 472 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC005297.2-201ENST00000450430 606 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC104073.1-201ENST00000451988 151 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RPS29P33-201ENST00000456717 146 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 PPIAP21-201ENST00000464473 501 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RN7SL41P-201ENST00000476144 297 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 HMGB1P36-201ENST00000487709 576 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC009646.1-201ENST00000510455 318 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC010342.1-201ENST00000514047 877 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 RNA5SP446-201ENST00000515955 82 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC118273.2-201ENST00000532092 465 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC008033.2-201ENST00000542626 177 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CENPUP2-201ENST00000555897 1186 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 MIR7154-201ENST00000620673 73 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 AC055839.1-201ENST00000634467 498 ntBASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
AMBRA1Q9C0C7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms