Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC007224.1-201ENST00000564410 144 ntBASIC3.83□□□□□ -1.8
UBXN1Q04323 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.83□□□□□ -1.8
UBXN1Q04323 SNORD84-203ENST00000584275 78 ntBASIC3.83□□□□□ -1.8
UBXN1Q04323 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
UBXN1Q04323 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.83□□□□□ -1.8
UBXN1Q04323 AC109454.4-201ENST00000623411 649 ntBASIC3.83□□□□□ -1.8
UBXN1Q04323 AC007823.1-201ENST00000569932 1566 ntBASIC3.83□□□□□ -1.8
UBXN1Q04323 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBXN1Q04323 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
UBXN1Q04323 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBXN1Q04323 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.82□□□□□ -1.8
UBXN1Q04323 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBXN1Q04323 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBXN1Q04323 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBXN1Q04323 AL513302.2-201ENST00000562313 1842 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 RIOK3P1-201ENST00000418778 1528 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 RNU6-1066P-201ENST00000363573 105 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 MIR591-201ENST00000385290 95 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 EI24P2-201ENST00000397776 1076 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC017079.2-201ENST00000416102 485 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 DBIP2-201ENST00000419076 262 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC099677.1-201ENST00000420575 175 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AP000907.1-201ENST00000428428 510 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 NEK4P1-201ENST00000433383 879 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 BX679664.1-201ENST00000434429 253 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.82□□□□□ -1.8
UBXN1Q04323 TPT1P12-201ENST00000448968 492 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 SSXP4-201ENST00000451349 245 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC007967.1-201ENST00000455422 1159 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 RPS4XP2-201ENST00000458402 793 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 HMGB1P25-201ENST00000468402 607 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC096751.1-202ENST00000502691 1067 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC016550.1-201ENST00000505348 785 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 RNU1-61P-201ENST00000516107 151 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 SNORA70.18-201ENST00000516696 98 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 MIR2276-201ENST00000516886 89 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 MTND1P36-201ENST00000522384 936 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AP003066.2-201ENST00000529375 555 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC023825.1-201ENST00000566704 1030 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC122134.1-202ENST00000569111 1201 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC022146.1-201ENST00000595307 847 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC099676.1-201ENST00000608886 657 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.82□□□□□ -1.8
UBXN1Q04323 AC092954.1-201ENST00000609121 445 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 VIS1.1-201ENST00000610517 203 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.82□□□□□ -1.8
UBXN1Q04323 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 U4.6-201ENST00000621618 127 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC110801.1-201ENST00000623590 212 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
UBXN1Q04323 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.82□□□□□ -1.8
UBXN1Q04323 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.81□□□□□ -1.8
UBXN1Q04323 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBXN1Q04323 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.81□□□□□ -1.8
UBXN1Q04323 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
UBXN1Q04323 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 SNORD9-201ENST00000362566 104 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 RNU6-492P-201ENST00000363035 104 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 RNA5SP51-201ENST00000364750 119 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 RNU6-657P-201ENST00000383904 107 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 SNORD3H-201ENST00000384486 214 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 U8.11-201ENST00000384699 133 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 U8.12-201ENST00000384701 133 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 RNU2-28P-201ENST00000410457 189 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AL024507.1-201ENST00000412741 274 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.81□□□□□ -1.8
UBXN1Q04323 SLC31A1P1-201ENST00000451221 567 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.81□□□□□ -1.8
UBXN1Q04323 U8.18-201ENST00000459285 133 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AC087312.1-201ENST00000471411 480 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 RPS4XP22-201ENST00000480755 780 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 KLRA1P-201ENST00000503499 986 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AC008837.1-201ENST00000511513 412 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 AC027309.2-201ENST00000520566 192 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AC104417.1-201ENST00000523974 751 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 OR4P1P-201ENST00000530808 1136 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AL389895.1-201ENST00000554127 252 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 PARP1P2-201ENST00000556806 195 ntBASIC3.81□□□□□ -1.8
UBXN1Q04323 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.81□□□□□ -1.8
UBXN1Q04323 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
UBXN1Q04323 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.81□□□□□ -1.8
UBXN1Q04323 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms