Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN18P56856 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN18P56856 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN18P56856 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN18P56856 AL645568.2-201ENST00000432815 1337 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 MIR184-201ENST00000384962 84 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 HMGB3P23-201ENST00000414981 585 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 RPL31P12-201ENST00000422587 358 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AC005300.1-201ENST00000428401 373 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 RABEPKP1-201ENST00000440529 1026 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN18P56856 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN18P56856 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 LSM6P2-201ENST00000552208 177 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN18P56856 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 AC023824.3-201ENST00000569003 562 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 MIR4738-201ENST00000579134 87 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN18P56856 AL031985.2-201ENST00000600955 480 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AL365400.2-201ENST00000605604 902 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 AC068831.7-201ENST00000616954 363 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN18P56856 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN18P56856 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
CLDN18P56856 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN18P56856 AC007496.3-201ENST00000624987 3443 ntBASIC3.05□□□□□ -1.92
CLDN18P56856 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 RNA5SP197-201ENST00000363357 119 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 MIR649-201ENST00000384843 97 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 Z99755.1-201ENST00000414048 380 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AL158825.1-201ENST00000414735 521 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC008173.1-201ENST00000418901 264 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 RPF2P1-201ENST00000424137 906 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC002075.2-201ENST00000425207 252 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN18P56856 FAR1P1-201ENST00000427163 934 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN18P56856 RNFT1P2-201ENST00000443064 757 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AL929288.2-201ENST00000446368 407 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 RPL32P34-201ENST00000486380 400 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN18P56856 AC112198.1-201ENST00000505369 1220 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN18P56856 SNORA70.19-201ENST00000516717 90 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN18P56856 IGJP1-201ENST00000522682 475 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
CLDN18P56856 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN18P56856 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN18P56856 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN18P56856 OR4T1P-201ENST00000554933 911 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN18P56856 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 MIR4276-201ENST00000584832 70 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 AC245100.7-201ENST00000609678 442 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC095031.1-201ENST00000623685 672 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 MTND2P41-201ENST00000637599 773 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC002546.1-201ENST00000588041 2504 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 AC118273.1-201ENST00000525324 3006 ntBASIC3.04□□□□□ -1.92
CLDN18P56856 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN18P56856 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CLDN18P56856 AL079305.1-201ENST00000623159 3008 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN18P56856 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN18P56856 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN18P56856 RNU6-989P-201ENST00000362756 107 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AL136116.1-201ENST00000403591 381 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN18P56856 YPEL5P1-201ENST00000419731 367 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN18P56856 VN1R42P-201ENST00000424651 344 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 AL035410.1-201ENST00000427409 427 ntBASIC3.03□□□□□ -1.92
CLDN18P56856 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms