Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RN7SKP162-201ENST00000363605 345 ntBASIC6.21□□□□□ -1.42
VARSP26640 LCN1P2-201ENST00000372030 223 ntBASIC6.21□□□□□ -1.42
VARSP26640 RNU6-214P-201ENST00000384130 107 ntBASIC6.21□□□□□ -1.42
VARSP26640 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VARSP26640 RNU6-1156P-201ENST00000410365 100 ntBASIC6.21□□□□□ -1.42
VARSP26640 RN7SKP281-201ENST00000410472 352 ntBASIC6.21□□□□□ -1.42
VARSP26640 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 PSMA2P3-201ENST00000429685 675 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC110602.1-201ENST00000437414 318 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.21□□□□□ -1.42
VARSP26640 AL031274.1-201ENST00000450334 232 ntBASIC6.21□□□□□ -1.42
VARSP26640 CFL1P4-201ENST00000451536 498 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 RNU5B-3P-201ENST00000516601 115 ntBASIC6.21□□□□□ -1.42
VARSP26640 RNU6-897P-201ENST00000517135 105 ntBASIC6.21□□□□□ -1.42
VARSP26640 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.21□□□□□ -1.42
VARSP26640 AC006512.2-201ENST00000543250 486 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC025423.5-201ENST00000550230 219 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC109446.1-201ENST00000566172 220 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC006600.1-201ENST00000572529 153 ntBASIC6.21□□□□□ -1.42
VARSP26640 RN7SL753P-201ENST00000581238 290 ntBASIC6.21□□□□□ -1.42
VARSP26640 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.21□□□□□ -1.42
VARSP26640 LINC02495-203ENST00000636704 242 ntBASIC6.21□□□□□ -1.42
VARSP26640 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.21□□□□□ -1.42
VARSP26640 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 AC108751.5-201ENST00000492880 1336 ntBASIC6.21□□□□□ -1.42
VARSP26640 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.21□□□□□ -1.42
VARSP26640 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
VARSP26640 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
VARSP26640 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VARSP26640 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
VARSP26640 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 AC025470.1-201ENST00000510053 2032 ntBASIC6.2□□□□□ -1.42
VARSP26640 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.2□□□□□ -1.42
VARSP26640 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 RNU6-545P-201ENST00000362681 104 ntBASIC6.2□□□□□ -1.42
VARSP26640 RNU6-434P-201ENST00000384376 107 ntBASIC6.2□□□□□ -1.42
VARSP26640 SNORA51.11-201ENST00000384442 131 ntBASIC6.2□□□□□ -1.42
VARSP26640 RNU6-125P-201ENST00000384505 107 ntBASIC6.2□□□□□ -1.42
VARSP26640 SAR1AP2-201ENST00000392696 594 ntBASIC6.2□□□□□ -1.42
VARSP26640 PCNPP3-201ENST00000393579 471 ntBASIC6.2□□□□□ -1.42
VARSP26640 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 U3.43-201ENST00000410734 213 ntBASIC6.2□□□□□ -1.42
VARSP26640 REREP1Y-201ENST00000422655 198 ntBASIC6.2□□□□□ -1.42
VARSP26640 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 MYL8P-204ENST00000431574 518 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.2□□□□□ -1.42
VARSP26640 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.2□□□□□ -1.42
VARSP26640 REREP2Y-201ENST00000439103 200 ntBASIC6.2□□□□□ -1.42
VARSP26640 NEFMP1-201ENST00000443423 1006 ntBASIC6.2□□□□□ -1.42
VARSP26640 FCF1P4-201ENST00000448326 183 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.2□□□□□ -1.42
VARSP26640 FTH1P2-201ENST00000466086 412 ntBASIC6.2□□□□□ -1.42
VARSP26640 RPL17P19-201ENST00000489069 552 ntBASIC6.2□□□□□ -1.42
VARSP26640 RN7SL101P-201ENST00000496350 279 ntBASIC6.2□□□□□ -1.42
VARSP26640 HSD3BP3-201ENST00000514706 994 ntBASIC6.2□□□□□ -1.42
VARSP26640 RNU2-69P-201ENST00000516061 100 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.2□□□□□ -1.42
VARSP26640 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 AC018552.1-201ENST00000562099 811 ntBASIC6.2□□□□□ -1.42
VARSP26640 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 AC005341.1-201ENST00000571086 708 ntBASIC6.2□□□□□ -1.42
VARSP26640 MIR4293-201ENST00000584305 78 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC073046.2-201ENST00000604756 527 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.2□□□□□ -1.42
VARSP26640 AC024255.1-201ENST00000614376 102 ntBASIC6.2□□□□□ -1.42
VARSP26640 AC111152.1-202ENST00000635848 339 ntBASIC6.2□□□□□ -1.42
VARSP26640 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.2□□□□□ -1.42
VARSP26640 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
VARSP26640 AP005435.3-201ENST00000531260 3198 ntBASIC6.2□□□□□ -1.42
VARSP26640 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.2□□□□□ -1.42
VARSP26640 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VARSP26640 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.19□□□□□ -1.42
VARSP26640 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 GABPAP-201ENST00000419271 1356 ntBASIC6.19□□□□□ -1.42
VARSP26640 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VARSP26640 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VARSP26640 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.19□□□□□ -1.42
VARSP26640 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms