Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL450326.2-201ENST00000421913 1962 ntBASIC6.22□□□□□ -1.41
RFX1P22670 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
RFX1P22670 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX1P22670 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX1P22670 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX1P22670 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 RN7SKP162-201ENST00000363605 345 ntBASIC6.22□□□□□ -1.41
RFX1P22670 RNU6-82P-201ENST00000363970 107 ntBASIC6.22□□□□□ -1.41
RFX1P22670 SNORD115-7-201ENST00000365306 82 ntBASIC6.22□□□□□ -1.41
RFX1P22670 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 RNU6-1013P-201ENST00000384180 107 ntBASIC6.22□□□□□ -1.41
RFX1P22670 CYB5AP4-201ENST00000396692 399 ntBASIC6.22□□□□□ -1.41
RFX1P22670 RNU4-65P-201ENST00000410473 140 ntBASIC6.22□□□□□ -1.41
RFX1P22670 RNF10P1-201ENST00000418589 369 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AL590609.2-201ENST00000421430 368 ntBASIC6.22□□□□□ -1.41
RFX1P22670 MTND2P23-201ENST00000422990 651 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AC018630.2-202ENST00000422992 927 ntBASIC6.22□□□□□ -1.41
RFX1P22670 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 GAPDHP58-201ENST00000438477 1006 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 AL031584.1-201ENST00000447169 754 ntBASIC6.22□□□□□ -1.41
RFX1P22670 RPS23P2-201ENST00000463671 415 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.22□□□□□ -1.41
RFX1P22670 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 GSTP1P1-201ENST00000548078 319 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 AL049779.2-201ENST00000553847 315 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.22□□□□□ -1.41
RFX1P22670 MIR1269B-201ENST00000580405 75 ntBASIC6.22□□□□□ -1.41
RFX1P22670 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 AC118658.2-201ENST00000618697 459 ntBASIC6.22□□□□□ -1.41
RFX1P22670 MIR6130-201ENST00000619419 109 ntBASIC6.22□□□□□ -1.41
RFX1P22670 AC025034.2-201ENST00000623264 286 ntBASIC6.22□□□□□ -1.41
RFX1P22670 TEX41-265ENST00000627785 704 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.22□□□□□ -1.41
RFX1P22670 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 AC244517.1-201ENST00000606030 2086 ntBASIC6.22□□□□□ -1.41
RFX1P22670 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 AC103710.2-202ENST00000641454 2853 ntBASIC6.22□□□□□ -1.41
RFX1P22670 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.22□□□□□ -1.41
RFX1P22670 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX1P22670 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.21□□□□□ -1.41
RFX1P22670 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
RFX1P22670 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.21□□□□□ -1.41
RFX1P22670 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
RFX1P22670 AC004076.2-201ENST00000620532 3323 ntBASIC6.21□□□□□ -1.41
RFX1P22670 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.21□□□□□ -1.42
RFX1P22670 AL353796.1-201ENST00000561542 3241 ntBASIC6.21□□□□□ -1.42
RFX1P22670 MTND5P3-201ENST00000438536 1800 ntBASIC6.21□□□□□ -1.42
RFX1P22670 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 RNA5SP46-201ENST00000362370 120 ntBASIC6.21□□□□□ -1.42
RFX1P22670 RNU1-150P-201ENST00000362491 162 ntBASIC6.21□□□□□ -1.42
RFX1P22670 Y_RNA.301-201ENST00000364990 103 ntBASIC6.21□□□□□ -1.42
RFX1P22670 RNU6-61P-201ENST00000365528 109 ntBASIC6.21□□□□□ -1.42
RFX1P22670 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.21□□□□□ -1.42
RFX1P22670 BX276092.6-201ENST00000430476 250 ntBASIC6.21□□□□□ -1.42
RFX1P22670 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.21□□□□□ -1.42
RFX1P22670 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.21□□□□□ -1.42
RFX1P22670 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.21□□□□□ -1.42
RFX1P22670 EEF1B2P6-201ENST00000445713 673 ntBASIC6.21□□□□□ -1.42
RFX1P22670 BX276092.8-201ENST00000455722 250 ntBASIC6.21□□□□□ -1.42
RFX1P22670 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.21□□□□□ -1.42
RFX1P22670 SNORD125-201ENST00000459538 96 ntBASIC6.21□□□□□ -1.42
RFX1P22670 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.21□□□□□ -1.42
RFX1P22670 RNU6-327P-201ENST00000516270 127 ntBASIC6.21□□□□□ -1.42
RFX1P22670 RNU6-1045P-201ENST00000516321 107 ntBASIC6.21□□□□□ -1.42
RFX1P22670 HMGN2P36-201ENST00000529541 409 ntBASIC6.21□□□□□ -1.42
RFX1P22670 AL137161.1-201ENST00000532231 390 ntBASIC6.21□□□□□ -1.42
RFX1P22670 MDM2-233ENST00000545204 398 ntTSL 5 BASIC6.21□□□□□ -1.42
RFX1P22670 AC127381.1-201ENST00000555979 939 ntBASIC6.21□□□□□ -1.42
RFX1P22670 AC093249.1-201ENST00000567049 203 ntBASIC6.21□□□□□ -1.42
RFX1P22670 OR1F2P-201ENST00000570470 933 ntBASIC6.21□□□□□ -1.42
RFX1P22670 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.21□□□□□ -1.42
RFX1P22670 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.21□□□□□ -1.42
RFX1P22670 AL360085.1-201ENST00000604713 532 ntBASIC6.21□□□□□ -1.42
RFX1P22670 uc_338.34-201ENST00000617467 174 ntBASIC6.21□□□□□ -1.42
RFX1P22670 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.21□□□□□ -1.42
RFX1P22670 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
RFX1P22670 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.21□□□□□ -1.42
RFX1P22670 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
RFX1P22670 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX1P22670 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms