Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.44□□□□□ -1.86
XRCC1P18887 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 BNIP3P31-201ENST00000604515 566 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.44□□□□□ -1.86
XRCC1P18887 AC109454.4-201ENST00000623411 649 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AC126544.2-201ENST00000625174 749 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AC106858.1-201ENST00000637497 429 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.44□□□□□ -1.86
XRCC1P18887 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
XRCC1P18887 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.44□□□□□ -1.86
XRCC1P18887 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
XRCC1P18887 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC091152.2-201ENST00000591628 2569 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 RNU1-75P-201ENST00000347264 129 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 SNORD46.1-201ENST00000364139 104 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 MIR34B-201ENST00000385076 84 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 EIF5P1-201ENST00000400019 1231 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 RN7SKP111-201ENST00000410349 271 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 RNA5SP31-201ENST00000411144 127 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 RN7SKP53-201ENST00000411337 315 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC009237.2-201ENST00000421358 284 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 AP000907.1-201ENST00000428428 510 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 NF1P3-201ENST00000457709 450 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.43□□□□□ -1.86
XRCC1P18887 snoU13.22-201ENST00000459428 104 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 RPL7P49-201ENST00000471402 708 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.43□□□□□ -1.86
XRCC1P18887 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 RNU2-58P-201ENST00000516403 183 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC104417.1-201ENST00000523974 751 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 OR4R3P-201ENST00000525084 838 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC007458.1-201ENST00000542812 373 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.43□□□□□ -1.86
XRCC1P18887 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 ELOCP35-201ENST00000604289 336 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AL355365.1-201ENST00000616480 294 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC121761.2-201ENST00000617300 689 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AL512427.1-201ENST00000618593 349 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC068722.2-201ENST00000618734 544 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.43□□□□□ -1.86
XRCC1P18887 AC010872.1-201ENST00000624225 675 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 MIR4278-201ENST00000636094 69 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.43□□□□□ -1.86
XRCC1P18887 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 AL353746.1-201ENST00000566293 6881 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
XRCC1P18887 AL355578.1-201ENST00000607405 1328 ntBASIC3.43□□□□□ -1.86
XRCC1P18887 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
XRCC1P18887 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
XRCC1P18887 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
XRCC1P18887 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
XRCC1P18887 RNU6-115P-201ENST00000364310 107 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
XRCC1P18887 MIR649-201ENST00000384843 97 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 AC092634.2-201ENST00000428146 1010 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC097713.2-201ENST00000430199 356 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 MTCYBP31-201ENST00000438855 1122 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
XRCC1P18887 RN7SL594P-201ENST00000470590 287 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC078817.1-201ENST00000492623 435 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC021146.5-201ENST00000503544 545 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 WBP1LP4-201ENST00000505043 344 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 RNU2-27P-201ENST00000516185 142 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 snoZ278.1-201ENST00000517059 112 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 ARL2BPP5-201ENST00000523141 481 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.42□□□□□ -1.86
XRCC1P18887 AC026333.2-201ENST00000542164 106 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 ZNF971P-201ENST00000562068 1249 ntBASIC3.42□□□□□ -1.86
XRCC1P18887 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.42□□□□□ -1.86
XRCC1P18887 MIR5186-201ENST00000577504 120 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms