Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCH2Q9Y6C5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCH2Q9Y6C5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PTCH2Q9Y6C5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC095050.2-201ENST00000510748 1458 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 FRG1BP-201ENST00000278882 761 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 SPRR2C-201ENST00000290702 219 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RNA5SP258-201ENST00000362750 119 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 Y_RNA.234-201ENST00000364409 97 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 MIR554-201ENST00000384874 96 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 MIR659-201ENST00000384963 97 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 MTND4LP20-201ENST00000402379 270 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RN7SKP202-201ENST00000410439 330 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RNU2-15P-201ENST00000410692 191 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 CYCSP10-201ENST00000417973 294 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RPEP2-201ENST00000432149 701 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 HSFY6P-201ENST00000445573 403 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL589765.3-201ENST00000446084 462 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 GAPDHP17-201ENST00000449858 1001 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC079168.2-201ENST00000453977 416 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RNU1-45P-201ENST00000517191 141 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 IGKV2-23-201ENST00000518729 323 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AP003730.1-201ENST00000524605 285 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 EEF1B2P4-201ENST00000551398 348 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL161713.1-201ENST00000555538 145 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC009852.2-201ENST00000567898 485 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC138965.3-201ENST00000623875 498 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 U3.53-201ENST00000628922 216 ntBASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.34□□□□□ -1.55
PTCH2Q9Y6C5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.34□□□□□ -1.56
PTCH2Q9Y6C5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.34□□□□□ -1.56
PTCH2Q9Y6C5 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 OR4G2P-201ENST00000328113 903 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 Y_RNA.46-201ENST00000362695 102 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 SNORA73.1-201ENST00000363107 205 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RNU6-97P-201ENST00000363387 104 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 Y_RNA.296-201ENST00000364930 108 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AL022722.2-201ENST00000402519 180 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RNU2-8P-201ENST00000410727 190 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC108734.1-201ENST00000439549 399 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RPL17P49-201ENST00000443728 411 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RPS20P24-201ENST00000457473 361 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RN7SL132P-201ENST00000478131 296 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC004924.1-201ENST00000480160 781 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RPL9P6-201ENST00000492764 598 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RN7SL810P-201ENST00000493031 276 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RPL36AP41-201ENST00000493820 306 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC006390.1-201ENST00000508068 283 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC005798.1-201ENST00000513715 387 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 RN7SKP234-201ENST00000517173 224 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 CENPUP2-201ENST00000555897 1186 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 CKS1BP3-201ENST00000600888 237 ntBASIC5.33□□□□□ -1.56
PTCH2Q9Y6C5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms