Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 AL049780.3-201ENST00000624612 1583 ntBASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 AC105074.1-201ENST00000623380 3095 ntBASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NECTIN3Q9NQS3 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AL136964.1-201ENST00000622038 2990 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RNA5SP258-201ENST00000362750 119 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 SNORD113.2-201ENST00000364166 89 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RNU5E-5P-201ENST00000365379 116 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RHOT1P2-201ENST00000366423 333 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RNA5SP397-201ENST00000391323 118 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AL445669.1-201ENST00000426743 755 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC006548.1-201ENST00000427470 102 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 MTCO1P19-201ENST00000443487 500 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 GDI2P2-201ENST00000445131 608 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RN7SL738P-201ENST00000470264 297 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RAP1BP2-201ENST00000478270 544 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 RNU6-714P-201ENST00000516963 103 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 DEFB109D-201ENST00000529497 240 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 CR383656.6-201ENST00000550518 394 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC008638.3-201ENST00000603341 463 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC055876.5-201ENST00000605667 259 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 HMGN2P28-201ENST00000606102 262 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AP000346.3-201ENST00000622821 210 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 CR381572.1-201ENST00000625098 102 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
NECTIN3Q9NQS3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
NECTIN3Q9NQS3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NECTIN3Q9NQS3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC108467.2-201ENST00000617640 1597 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 DHX40P1-201ENST00000588725 1412 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC008033.1-201ENST00000216407 1162 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 OR4K15-201ENST00000305051 1216 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 FGF7P2-201ENST00000332473 296 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 RN7SKP115-201ENST00000363177 317 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 SNORA71.2-201ENST00000364941 134 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 RNU6-533P-201ENST00000384144 107 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 RNA5SP332-201ENST00000391063 115 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 Z98745.1-201ENST00000402553 494 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AL049693.1-201ENST00000402760 611 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 FGF7P3-201ENST00000454645 303 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 NDUFA12P1-201ENST00000455914 406 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 MTCO1P42-201ENST00000457379 726 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 RNA5SP269-201ENST00000459032 137 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 SCARNA10-201ENST00000459255 330 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 AC091435.1-201ENST00000505442 584 ntBASIC4.33□□□□□ -1.72
NECTIN3Q9NQS3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms