Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BNIP3P33-201ENST00000598912 569 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AP001429.1-201ENST00000602568 530 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 RPL26P30-202ENST00000602923 645 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AC006065.5-201ENST00000623427 349 ntBASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM55Q9BYV6 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 LINC00622-201ENST00000562811 1570 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC023421.1-201ENST00000590535 1785 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 OR1S2-201ENST00000302592 978 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RNA5SP507-201ENST00000363603 121 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL645927.1-201ENST00000396783 406 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL078599.1-201ENST00000402075 293 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RN7SKP16-201ENST00000410180 299 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RPS12P23-201ENST00000419579 400 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 OR2AH1P-201ENST00000425717 928 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL662791.1-201ENST00000441992 928 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RPL23AP20-201ENST00000447965 421 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RN7SL329P-201ENST00000467740 299 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC072052.1-201ENST00000496556 306 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RNU4-60P-201ENST00000517239 135 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC090572.1-201ENST00000519251 160 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 OR4R3P-201ENST00000525084 838 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC025678.1-201ENST00000567861 338 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC008966.2-201ENST00000606157 453 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AL158211.4-201ENST00000606988 584 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 MIR6798-201ENST00000612887 67 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC022306.2-201ENST00000617563 647 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 AC138915.3-201ENST00000562908 1389 ntBASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM55Q9BYV6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 Z73965.1-201ENST00000623412 2297 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RNA5SP183-201ENST00000362452 119 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RNU1-39P-201ENST00000383897 165 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 Y_RNA.390-201ENST00000383932 102 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 MIR585-201ENST00000384887 94 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AL359643.1-201ENST00000404109 423 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RN7SKP247-201ENST00000411094 308 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RPL23AP27-201ENST00000415161 451 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 MTATP6P18-201ENST00000417994 673 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 BX842559.2-201ENST00000451418 605 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RNU7-59P-201ENST00000459101 61 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AC004453.1-201ENST00000487895 408 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 RPS23P1-201ENST00000491662 432 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 HMGB3P16-201ENST00000508037 287 ntBASIC5.24□□□□□ -1.57
TRIM55Q9BYV6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms