Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RPS4XP5-201ENST00000419038 768 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RPS15AP40-201ENST00000419621 391 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC091286.1-201ENST00000431233 461 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 SNRPBP1-201ENST00000443634 282 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 TPT1P13-201ENST00000449760 499 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RN7SL393P-201ENST00000463588 296 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AL133445.1-201ENST00000467051 452 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RN7SL790P-201ENST00000474043 298 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC012123.2-201ENST00000485809 248 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 ULK4P1-202ENST00000565174 503 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 RN7SL652P-201ENST00000577769 300 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 MIR4420-201ENST00000583944 77 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC010463.3-201ENST00000594077 500 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 AC093799.2-201ENST00000610062 578 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 RBPJP6-201ENST00000411556 1431 ntBASIC6.05□□□□□ -1.44
USB1Q9BQ65 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USB1Q9BQ65 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.05□□□□□ -1.44
USB1Q9BQ65 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 Y_RNA.81-201ENST00000362997 102 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 Y_RNA.541-201ENST00000384640 113 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 RNU6-817P-201ENST00000391083 104 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 UBBP1-201ENST00000392399 473 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 DPPA2P2-201ENST00000418220 897 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 CYP4F32P-201ENST00000426492 504 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 MTND3P9-201ENST00000429526 346 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 GAPDHP20-201ENST00000444107 1007 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AL360271.2-201ENST00000447710 161 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC010469.2-201ENST00000496412 480 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 RNU6-346P-201ENST00000516288 111 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 MRPS36P4-201ENST00000534436 298 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC025884.1-201ENST00000556034 378 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 HMGN1P26-201ENST00000558737 303 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 MIR4301-201ENST00000577203 66 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 RN7SL199P-201ENST00000578752 281 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 RN7SL656P-201ENST00000579044 281 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 LRRC37A5P-203ENST00000580181 585 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 RN7SL404P-201ENST00000582421 281 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 AP001485.1-201ENST00000604799 199 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 U2.14-201ENST00000615943 113 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC091953.5-201ENST00000622919 233 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC243829.7-201ENST00000633081 225 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 AC011471.4-201ENST00000638271 216 ntBASIC6.04□□□□□ -1.44
USB1Q9BQ65 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USB1Q9BQ65 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.04□□□□□ -1.44
USB1Q9BQ65 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.03□□□□□ -1.44
USB1Q9BQ65 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USB1Q9BQ65 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms