Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXA13P31271 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
HOXA13P31271 AC023158.2-201ENST00000614876 543 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 AC121761.2-201ENST00000617300 689 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 AC091905.1-201ENST00000624400 311 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA13P31271 AP000553.6-201ENST00000641242 118 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA13P31271 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA13P31271 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA13P31271 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA13P31271 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA13P31271 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXA13P31271 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.19□□□□□ -1.74
HOXA13P31271 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA13P31271 CDR1-202ENST00000625883 1485 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 AL136964.1-201ENST00000622038 2990 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
HOXA13P31271 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 U3.15-201ENST00000365398 212 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 HMGB1P49-201ENST00000418882 569 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA13P31271 SDCBPP2-201ENST00000424643 885 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA13P31271 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AL451050.1-201ENST00000450126 415 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 HMGB3P22-202ENST00000451823 572 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 MTCO2P6-201ENST00000463134 685 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC091153.1-201ENST00000466297 402 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC092757.1-201ENST00000467293 467 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.18□□□□□ -1.74
HOXA13P31271 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 AC005798.1-201ENST00000513715 387 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 RN7SKP13-201ENST00000515933 244 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA13P31271 AP001636.2-201ENST00000525517 696 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA13P31271 AC023538.1-201ENST00000534576 736 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 AC008127.2-201ENST00000549925 1075 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC023161.2-201ENST00000551218 780 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA13P31271 AC004223.2-201ENST00000590309 544 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA13P31271 AC091946.2-201ENST00000606105 291 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AL513477.2-201ENST00000607858 568 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC131235.4-201ENST00000609288 620 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC069200.1-201ENST00000609511 323 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC105429.2-201ENST00000610567 517 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC097478.2-201ENST00000610572 514 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AL357559.1-201ENST00000622228 274 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC073348.1-201ENST00000623002 331 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC004777.1-201ENST00000624317 287 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 AC116618.1-201ENST00000634617 774 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA13P31271 BDP1P-201ENST00000582658 1990 ntBASIC4.18□□□□□ -1.74
HOXA13P31271 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA13P31271 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA13P31271 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC106871.1-201ENST00000568324 3102 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA13P31271 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 AC090337.1-201ENST00000579651 2074 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA13P31271 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 MIR448-201ENST00000362131 111 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA13P31271 MIR708-201ENST00000390708 88 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 SNRPEP2-201ENST00000397592 279 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL121834.1-202ENST00000404494 277 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 MIR1250-201ENST00000408098 113 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA13P31271 AL133384.1-201ENST00000412744 351 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 DBIP2-201ENST00000419076 262 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 MTCO2P21-201ENST00000419780 677 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 AL391219.1-201ENST00000422570 483 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA13P31271 RPL31P54-201ENST00000429803 370 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA13P31271 AL050321.1-201ENST00000432363 400 ntBASIC4.17□□□□□ -1.74
HOXA13P31271 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.17□□□□□ -1.74
HOXA13P31271 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA13P31271 CKS1BP5-201ENST00000434172 273 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms