Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 OR5H2-201ENST00000355273 945 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 SNORA44-201ENST00000384584 132 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 HMGB1P10-201ENST00000395823 563 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 SDCBPP3-201ENST00000419629 891 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 ZNF965P-201ENST00000432501 817 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 ELOCP11-201ENST00000436690 332 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 MTCYBP31-201ENST00000438855 1122 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 ELOCP16-201ENST00000444494 332 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC023512.1-201ENST00000444513 499 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 NIPA2P5-201ENST00000452282 464 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AP001025.2-201ENST00000490908 477 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC005921.1-201ENST00000510589 286 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 SETP12-201ENST00000514068 805 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 HAUS1P3-201ENST00000523909 662 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 OR8K2P-201ENST00000524645 927 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 TRAV37-201ENST00000553906 342 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.29□□□□□ -1.88
CTDNEP1O95476 AL450270.1-201ENST00000606160 391 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 AC004775.1-201ENST00000607389 753 ntBASIC3.29□□□□□ -1.88
CTDNEP1O95476 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTDNEP1O95476 AL353746.1-201ENST00000566293 6881 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 UBA52P6-201ENST00000399822 382 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AL356057.1-202ENST00000402263 756 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 ARL2BPP3-201ENST00000421226 480 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 AL662791.1-201ENST00000441992 928 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 HMGB1P26-201ENST00000452520 628 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 MTND2P6-201ENST00000455337 1030 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 RPL37P3-201ENST00000456825 293 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC108729.2-201ENST00000476543 840 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AL035404.1-201ENST00000497982 568 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 SCARNA13-201ENST00000516672 275 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTDNEP1O95476 H3F3AP1-201ENST00000559984 334 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC107871.2-201ENST00000612894 502 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 CYCSP41-201ENST00000616920 296 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC006213.5-201ENST00000619673 288 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 Z99129.2-201ENST00000619967 314 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 AC091948.2-201ENST00000636510 279 ntBASIC3.28□□□□□ -1.88
CTDNEP1O95476 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTDNEP1O95476 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
CTDNEP1O95476 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 ZNF33CP-201ENST00000432492 2030 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 SNORD115-48-201ENST00000364764 76 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 RNU6-185P-201ENST00000384421 107 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 AL592148.1-201ENST00000413568 445 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 AL390023.1-201ENST00000428836 262 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 SETP5-201ENST00000437270 562 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC103975.1-201ENST00000482506 483 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 PTP4A1P6-201ENST00000531034 478 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC079600.2-201ENST00000550076 130 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 MIR548Y-201ENST00000582739 110 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC115085.1-201ENST00000588924 229 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.27□□□□□ -1.89
CTDNEP1O95476 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC084035.1-201ENST00000634543 607 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 AC000403.1-201ENST00000613696 3585 ntBASIC3.27□□□□□ -1.89
CTDNEP1O95476 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTDNEP1O95476 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDNEP1O95476 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTDNEP1O95476 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTDNEP1O95476 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms