Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC128687.1-201ENST00000605304 619 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AL365400.2-201ENST00000605604 902 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 MIR6748-201ENST00000610433 71 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC024257.5-201ENST00000612739 531 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 RNVU1-4-201ENST00000612985 164 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 MIR6758-201ENST00000620653 63 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC040168.1-201ENST00000623594 991 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC006963.1-201ENST00000624003 1052 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC28A1O00337 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AP004289.2-201ENST00000444413 1457 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 AC066616.2-201ENST00000559334 1481 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SLC28A1O00337 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.52□□□□□ -1.85
SLC28A1O00337 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
SLC28A1O00337 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.52□□□□□ -1.85
SLC28A1O00337 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC28A1O00337 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC107982.1-201ENST00000507171 1300 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 MTCO1P23-201ENST00000415223 1526 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 RNA5SP42-201ENST00000364278 115 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 SNORD116-12-201ENST00000384468 92 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 MIR141-201ENST00000384975 95 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC28A1O00337 HSPE1P26-201ENST00000405341 275 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC28A1O00337 RNU2-42P-201ENST00000410697 113 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC009220.1-201ENST00000451614 275 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AC104164.3-201ENST00000467363 1258 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC108734.3-201ENST00000481241 1165 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 OR4G11P-201ENST00000492842 939 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 RPL7P47-201ENST00000497299 556 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC026784.1-201ENST00000507986 352 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 RNU6-1225P-201ENST00000516336 65 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 RNU6-1073P-201ENST00000517182 106 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC023161.2-201ENST00000551218 780 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.51□□□□□ -1.85
SLC28A1O00337 MTND3P13-201ENST00000574391 343 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AL158163.2-201ENST00000619110 700 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AL354798.1-201ENST00000622505 329 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC048347.1-201ENST00000624621 427 ntBASIC3.51□□□□□ -1.85
SLC28A1O00337 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SLC28A1O00337 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
SLC28A1O00337 AL133383.2-201ENST00000622958 2336 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SLC28A1O00337 RNA5SP283-201ENST00000365604 119 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 U3.29-201ENST00000391296 212 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 ARF4P3-201ENST00000397387 509 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SLC28A1O00337 AL136116.1-201ENST00000403591 381 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 RNU6-628P-201ENST00000410675 107 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 RPL21P66-201ENST00000426566 466 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.5□□□□□ -1.85
SLC28A1O00337 OR4C10P-201ENST00000434991 931 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.5□□□□□ -1.85
SLC28A1O00337 AC010285.1-201ENST00000470580 392 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 ACTG1P13-201ENST00000486987 1043 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 HMGB1P22-201ENST00000505315 124 ntBASIC3.5□□□□□ -1.85
SLC28A1O00337 AC113420.1-201ENST00000507903 571 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms