Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SNRPGP1-201ENST00000553864 222 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AL731537.2-201ENST00000561565 951 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 MIR5186-201ENST00000577504 120 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AL109653.1-201ENST00000603091 248 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC006077.1-201ENST00000604746 343 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC092650.2-201ENST00000619984 902 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC092326.2-201ENST00000624772 1561 ntBASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TM9SF3Q9HD45 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 OR6K3-202ENST00000368146 996 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 MTCO3P31-201ENST00000405526 789 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 RNA5SP120-201ENST00000410900 112 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 DBIP2-201ENST00000419076 262 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AL500527.1-201ENST00000448532 255 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 RPS27P23-201ENST00000487608 251 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 RN7SKP57-201ENST00000517248 293 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC008489.1-201ENST00000524271 483 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC011492.1-201ENST00000600023 315 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC005000.2-201ENST00000605468 310 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC016877.3-201ENST00000606778 504 ntBASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
TM9SF3Q9HD45 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 MTCO1P6-201ENST00000481192 1384 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RNU4-35P-201ENST00000362588 141 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RNU6-441P-201ENST00000384545 106 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 NDUFB4P4-201ENST00000404822 243 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL357078.2-201ENST00000416486 427 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC005326.1-201ENST00000429197 123 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC005019.1-201ENST00000436455 431 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 HIGD1AP11-201ENST00000438361 280 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC092170.1-201ENST00000440211 356 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RPL17P49-201ENST00000443728 411 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RNU2-27P-201ENST00000516185 142 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC095057.3-201ENST00000567102 1157 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC011471.1-201ENST00000585766 187 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 VN1R92P-201ENST00000598511 928 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 HSPE1P14-201ENST00000605812 302 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AL450270.1-201ENST00000606160 391 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC018816.2-201ENST00000621460 353 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TM9SF3Q9HD45 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms