Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AL672167.1-205ENST00000641112 3080 ntBASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 THADA-202ENST00000402360 2974 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SP140-204ENST00000417495 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 AC092821.3-202ENST00000641304 2767 ntBASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 AC145207.5-201ENST00000582866 2682 ntBASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 MAK-202ENST00000354489 3941 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SLC39A6-201ENST00000269187 3543 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SERPINA12-201ENST00000341228 2061 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SPATA31D5P-201ENST00000376459 4784 ntBASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 CRX-207ENST00000613299 4193 ntTSL 3 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 SP140-201ENST00000343805 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC1.65□□□□□ -2.14
KRTAP4-4Q9BYR3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC011266.1-201ENST00000624119 3569 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC008985.1-201ENST00000624169 2239 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SNURFL-201ENST00000309296 343 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR331-201ENST00000362302 94 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORD38.1-201ENST00000363863 68 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 Y_RNA.247-201ENST00000364500 92 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 KRTAP20-3-201ENST00000382826 273 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-160P-201ENST00000384591 107 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-817P-201ENST00000391083 104 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ENSAP1-201ENST00000392855 326 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 HIST1H2BPS2-201ENST00000402707 340 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU2-49P-201ENST00000410666 184 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SNRPGP11-201ENST00000411777 232 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AL133384.1-201ENST00000412744 351 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC245452.3-201ENST00000413294 162 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 CYCSP10-201ENST00000417973 294 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AL671883.1-201ENST00000421191 306 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 GRPEL2P2-201ENST00000421856 670 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 E2F4P1-201ENST00000422443 1133 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AC009362.1-201ENST00000427253 406 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SNX18P14-201ENST00000429308 574 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 HBBP1-201ENST00000433329 439 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 GAPDHP68-201ENST00000434621 1008 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 ASS1P11-201ENST00000441309 1216 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 IGKV1D-35-201ENST00000442736 271 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 RPL35P4-201ENST00000446039 322 ntBASIC1.65□□□□□ -2.15
KRTAP4-4Q9BYR3 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms