Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AL365400.2-201ENST00000605604 902 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 RNU4-89P-201ENST00000607443 133 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC128687.2-201ENST00000609657 566 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC005332.6-201ENST00000613178 446 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 ZYXP1-201ENST00000617638 118 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC112484.5-201ENST00000624189 228 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 AC116667.1-201ENST00000604855 2072 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.86□□□□□ -1.79
VMP1Q96GC9 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VMP1Q96GC9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.86□□□□□ -1.79
VMP1Q96GC9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 RNU1-13P-201ENST00000384499 162 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 RNU11-4P-201ENST00000391149 133 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 SNORA48.8-201ENST00000391324 134 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 RPL21P32-201ENST00000419877 477 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 MTCO1P39-201ENST00000426148 480 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 RPL21P133-201ENST00000443666 476 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 HSFY6P-201ENST00000445573 403 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC112492.1-201ENST00000449607 712 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 USP9YP34-201ENST00000453983 808 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 RAD23BP3-201ENST00000454157 1152 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 RPL7P9-201ENST00000468715 747 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LRRC6P1-201ENST00000532188 885 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 COX6CP3-201ENST00000580869 223 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AL390838.2-201ENST00000602394 274 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AL451044.1-201ENST00000604867 238 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC106028.5-201ENST00000610332 395 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC068831.7-201ENST00000616954 363 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AP005264.7-201ENST00000625003 745 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 AC068724.3-201ENST00000625906 87 ntBASIC3.85□□□□□ -1.79
VMP1Q96GC9 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VMP1Q96GC9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
VMP1Q96GC9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 SNORA60-201ENST00000362396 134 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 RNU1-18P-201ENST00000363062 164 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
VMP1Q96GC9 RNU6-224P-201ENST00000384055 107 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 HMGN2P8-201ENST00000391458 268 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 SNRPEP2-201ENST00000397592 279 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL590704.1-201ENST00000402856 794 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AC092017.2-201ENST00000427600 362 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 GTF2IP7-202ENST00000436677 309 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 USP9YP22-201ENST00000438971 294 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 RRM2P4-201ENST00000441721 562 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 Z95327.1-201ENST00000446082 482 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 HMGB3P8-201ENST00000449709 577 ntBASIC3.84□□□□□ -1.79
VMP1Q96GC9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VMP1Q96GC9 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms