Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 OR4A45P-201ENST00000529954 901 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 EIF1P4-201ENST00000572664 335 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 CYCSP40-201ENST00000575927 294 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RNU6-88P-201ENST00000606801 100 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC015813.4-201ENST00000610469 179 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC010678.1-201ENST00000614118 713 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AC000123.2-201ENST00000623124 461 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 AL603839.4-201ENST00000624658 1005 ntBASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SLC44A4Q53GD3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC012020.1-201ENST00000624541 1728 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RNU6-462P-201ENST00000362659 105 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RNU5F-7P-201ENST00000363696 115 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 MTCYBP36-201ENST00000404146 440 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL445189.1-201ENST00000405722 338 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TMSB10P2-201ENST00000416049 131 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC083875.1-201ENST00000419509 405 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RPS15AP40-201ENST00000419621 391 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RPL7P57-201ENST00000423238 740 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL365184.2-201ENST00000431139 435 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL831737.1-201ENST00000441288 271 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 COX6CP12-201ENST00000446748 202 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TRBV26-201ENST00000456572 344 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 SNORA84-201ENST00000459229 133 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 SCARNA10-201ENST00000459255 330 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RNA5SP249-201ENST00000516127 99 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RPL23AP53-201ENST00000521854 457 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 OR5G4P-201ENST00000525251 760 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 MED28P5-201ENST00000528254 438 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC074029.1-201ENST00000552531 1044 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC234778.2-201ENST00000566241 354 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AL121834.1-201ENST00000572284 509 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 MTND1P15-201ENST00000579262 949 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AP001004.1-201ENST00000582468 324 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 MIR548AB-201ENST00000584917 84 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RNA5SP196-201ENST00000625967 102 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC095050.2-201ENST00000510748 1458 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 AC125257.1-201ENST00000560400 2930 ntBASIC4.73□□□□□ -1.65
SLC44A4Q53GD3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 MTCO1P23-201ENST00000415223 1526 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 RNU6-501P-201ENST00000364072 100 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 RNU6-289P-201ENST00000364093 107 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 AL359837.1-201ENST00000381357 287 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 MIR659-201ENST00000384963 97 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.72□□□□□ -1.65
SLC44A4Q53GD3 OR8G2P-201ENST00000412796 908 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms