Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL161734.1-201ENST00000609720 557 ntBASIC4.47□□□□□ -1.69
NKX6-1P78426 AC091304.9-201ENST00000612091 226 ntBASIC4.47□□□□□ -1.69
NKX6-1P78426 AC087385.3-201ENST00000620477 187 ntBASIC4.47□□□□□ -1.69
NKX6-1P78426 AP006248.2-201ENST00000623309 592 ntBASIC4.47□□□□□ -1.69
NKX6-1P78426 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.47□□□□□ -1.69
NKX6-1P78426 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX6-1P78426 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX6-1P78426 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NKX6-1P78426 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
NKX6-1P78426 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX6-1P78426 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NKX6-1P78426 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NKX6-1P78426 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
NKX6-1P78426 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AL450345.1-202ENST00000605741 3881 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 RPS16P5-201ENST00000406501 404 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 MIR1271-201ENST00000408537 86 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 RNU4-78P-201ENST00000410940 126 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 DDX39BP1-205ENST00000422507 192 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 OR2AH1P-201ENST00000425717 928 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 KNOP1P3-201ENST00000446933 426 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 MTCO3P20-201ENST00000454926 688 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC021660.1-201ENST00000465006 554 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC068587.1-201ENST00000483613 781 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 RPL9P6-201ENST00000492764 598 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AL139099.1-201ENST00000497398 403 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 RN7SKP244-201ENST00000516513 307 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX6-1P78426 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 HMGB3P26-201ENST00000560051 582 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 RN7SL435P-201ENST00000584418 282 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC007684.1-201ENST00000609671 477 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AL158209.2-201ENST00000619266 216 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 AC002550.2-201ENST00000621246 394 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 BMS1P21-201ENST00000634565 365 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 OR5H6-203ENST00000642105 978 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NKX6-1P78426 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX6-1P78426 IRF5P1-201ENST00000504852 2164 ntBASIC4.46□□□□□ -1.7
NKX6-1P78426 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
NKX6-1P78426 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 AC000123.3-201ENST00000624029 4975 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX6-1P78426 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NKX6-1P78426 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 AC024560.2-201ENST00000507981 1497 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 RNU6-263P-201ENST00000363811 107 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 UBBP2-201ENST00000376781 231 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 RNU6-398P-201ENST00000384143 109 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 RNA5SP241-201ENST00000391326 114 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 GSTA9P-201ENST00000406231 611 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NKX6-1P78426 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX6-1P78426 CHEK2P3-201ENST00000416118 248 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 AC013429.2-201ENST00000418798 781 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 AC016712.1-201ENST00000431088 378 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX6-1P78426 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX6-1P78426 AL049734.2-201ENST00000441066 616 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 AC093392.2-201ENST00000450682 337 ntBASIC4.45□□□□□ -1.7
NKX6-1P78426 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX6-1P78426 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX6-1P78426 AC012170.1-201ENST00000495139 359 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms