Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX9Q9Y5X1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX9Q9Y5X1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SNX9Q9Y5X1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SNX9Q9Y5X1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX9Q9Y5X1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 AC211429.1-201ENST00000415277 523 ntBASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 AC133561.5-201ENST00000635547 218 ntBASIC20.58■□□□□ 0.89
SNX9Q9Y5X1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 Z82202.1-201ENST00000623446 1880 ntBASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.58■□□□□ 0.88
SNX9Q9Y5X1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 AP005242.2-201ENST00000580065 1175 ntBASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX9Q9Y5X1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 AC096733.2-201ENST00000609937 1394 ntBASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 CYP2D8P-201ENST00000433633 1490 ntBASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX9Q9Y5X1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms