Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHB7Q9Y5E2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 AC112907.2-201ENST00000448639 330 ntBASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHB7Q9Y5E2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 VENTXP5-201ENST00000523979 775 ntBASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 GCSHP2-201ENST00000560971 527 ntBASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 AC116407.4-201ENST00000623319 1061 ntBASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHB7Q9Y5E2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
PCDHB7Q9Y5E2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 STARP1-201ENST00000397973 869 ntBASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 AL136038.3-201ENST00000561909 1096 ntBASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHB7Q9Y5E2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 AC099778.1-201ENST00000568593 1911 ntBASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 ZNF815P-204ENST00000434898 1737 ntBASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDHB7Q9Y5E2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms