Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 UPK3BP1-201ENST00000428678 509 ntBASIC26.31■■□□□ 1.8
NINLQ9Y2I6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NINLQ9Y2I6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AC112907.3-201ENST00000577781 2400 ntBASIC26.3■■□□□ 1.8
NINLQ9Y2I6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC26.3■■□□□ 1.8
NINLQ9Y2I6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 SLC25A24-204ENST00000569674 2357 ntBASIC26.29■■□□□ 1.8
NINLQ9Y2I6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 FAM8A6P-201ENST00000407496 1135 ntBASIC26.29■■□□□ 1.8
NINLQ9Y2I6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 MYC-208ENST00000641036 567 ntBASIC26.29■■□□□ 1.8
NINLQ9Y2I6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
NINLQ9Y2I6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.28■■□□□ 1.8
NINLQ9Y2I6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 AK4P3-201ENST00000418260 669 ntBASIC26.28■■□□□ 1.8
NINLQ9Y2I6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 YBX1P2-201ENST00000489612 999 ntBASIC26.28■■□□□ 1.8
NINLQ9Y2I6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NINLQ9Y2I6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 AC026396.1-201ENST00000419388 421 ntBASIC26.27■■□□□ 1.8
NINLQ9Y2I6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 COX11P1-201ENST00000489116 835 ntBASIC26.27■■□□□ 1.8
NINLQ9Y2I6 NMU-205ENST00000511469 756 ntTSL 3 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NINLQ9Y2I6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
NINLQ9Y2I6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms