Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 AL359736.2-201ENST00000621992 437 ntBASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 AC093503.3-201ENST00000624917 2352 ntBASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHRNA9Q9UGM1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 AC098590.1-201ENST00000468126 897 ntBASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 AC142381.4-202ENST00000563973 229 ntBASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
CHRNA9Q9UGM1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
CHRNA9Q9UGM1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms