Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 AL353708.3-201ENST00000610272 989 ntBASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NCKIPSDQ9NZQ3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 AP002982.1-201ENST00000492365 877 ntBASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCKIPSDQ9NZQ3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NCKIPSDQ9NZQ3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 AC012306.2-201ENST00000609350 630 ntBASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCKIPSDQ9NZQ3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 MMP23A-201ENST00000234610 1017 ntBASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 KRT18P21-201ENST00000515767 1272 ntBASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.4■□□□□ 0.7
NCKIPSDQ9NZQ3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms