Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ABCF3Q9NUQ8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 AC020916.1-201ENST00000587762 1774 ntBASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 AC092118.2-201ENST00000613495 667 ntBASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.5■□□□□ 0.71
ABCF3Q9NUQ8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 AC091874.3-201ENST00000512672 1195 ntBASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 AC009237.14-201ENST00000609975 1594 ntBASIC19.49■□□□□ 0.71
ABCF3Q9NUQ8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 AC097658.1-201ENST00000475555 843 ntBASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ABCF3Q9NUQ8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms