Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRMT13Q9NUP7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 AC092119.3-201ENST00000612618 583 ntBASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRMT13Q9NUP7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 HBZP1-201ENST00000354915 429 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 TSPY21P-201ENST00000433481 731 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 TSPY23P-201ENST00000440136 739 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 AC092597.1-201ENST00000487352 616 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 AC007375.3-201ENST00000600936 2314 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 NPAP1P7-201ENST00000613027 823 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 AL691432.3-201ENST00000621860 400 ntBASIC21.08■□□□□ 0.97
TRMT13Q9NUP7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRMT13Q9NUP7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRMT13Q9NUP7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRMT13Q9NUP7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
TRMT13Q9NUP7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.08■□□□□ 0.96
TRMT13Q9NUP7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRMT13Q9NUP7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms