Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 AC116351.2-201ENST00000606540 1585 ntBASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PCDHB16Q9NRJ7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 AC018553.1-201ENST00000616682 1458 ntBASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 KRT17P1-201ENST00000399211 1546 ntBASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PCDHB16Q9NRJ7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 LINC01465-201ENST00000408887 1940 ntBASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 AC026185.1-201ENST00000445748 174 ntBASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 AC073111.5-205ENST00000641717 521 ntBASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 PCDHB18P-201ENST00000524813 2368 ntBASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PCDHB16Q9NRJ7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB16Q9NRJ7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms