Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC006333.2-201ENST00000607957 2099 ntBASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 OR6D1P-203ENST00000641209 4860 ntBASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SND1-IT1Q9HBX3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 KRT19P1-201ENST00000405746 1186 ntBASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 AL591742.1-201ENST00000604433 565 ntBASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 AL139246.5-201ENST00000606645 996 ntBASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SND1-IT1Q9HBX3 AC020916.1-201ENST00000587762 1774 ntBASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 WIZP1-201ENST00000531444 2299 ntBASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 UBE2DNL-204ENST00000602536 740 ntBASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.86□□□□□ -0.35
SND1-IT1Q9HBX3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SND1-IT1Q9HBX3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SND1-IT1Q9HBX3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms