Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX47Q9H0S4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 AC005181.1-201ENST00000604782 1256 ntBASIC20.02■□□□□ 0.8
DDX47Q9H0S4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.02■□□□□ 0.8
DDX47Q9H0S4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
DDX47Q9H0S4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.02■□□□□ 0.79
DDX47Q9H0S4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDX47Q9H0S4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDX47Q9H0S4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX47Q9H0S4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.02■□□□□ 0.79
DDX47Q9H0S4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDX47Q9H0S4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 AC079598.2-202ENST00000546624 1451 ntBASIC20■□□□□ 0.79
DDX47Q9H0S4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20■□□□□ 0.79
DDX47Q9H0S4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
DDX47Q9H0S4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20■□□□□ 0.79
DDX47Q9H0S4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 BICD1-207ENST00000551848 1962 ntBASIC20■□□□□ 0.79
DDX47Q9H0S4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 GOLGA6L3-201ENST00000507199 1679 ntBASIC20■□□□□ 0.79
DDX47Q9H0S4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
DDX47Q9H0S4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDX47Q9H0S4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDX47Q9H0S4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms