Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC116562.2-201ENST00000507042 360 ntBASIC13.37□□□□□ -0.27
UPK3BQ9BT76 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 CR392000.1-201ENST00000624770 1228 ntBASIC13.37□□□□□ -0.27
UPK3BQ9BT76 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 KRT8P8-201ENST00000434750 1448 ntBASIC13.37□□□□□ -0.27
UPK3BQ9BT76 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK3BQ9BT76 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 AL355075.4-201ENST00000554988 638 ntBASIC13.36□□□□□ -0.27
UPK3BQ9BT76 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK3BQ9BT76 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.35□□□□□ -0.27
UPK3BQ9BT76 AC131212.4-201ENST00000623606 975 ntBASIC13.35□□□□□ -0.27
UPK3BQ9BT76 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 FSCN1P1-201ENST00000568912 1481 ntBASIC13.35□□□□□ -0.27
UPK3BQ9BT76 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UPK3BQ9BT76 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK3BQ9BT76 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK3BQ9BT76 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
UPK3BQ9BT76 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK3BQ9BT76 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK3BQ9BT76 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms