Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PTBP1P-201ENST00000554374 1601 ntBASIC16.95■□□□□ 0.3
VRK1Q99986 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.95■□□□□ 0.3
VRK1Q99986 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.95■□□□□ 0.3
VRK1Q99986 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK1Q99986 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VRK1Q99986 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VRK1Q99986 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.94■□□□□ 0.3
VRK1Q99986 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VRK1Q99986 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.94■□□□□ 0.3
VRK1Q99986 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.94■□□□□ 0.3
VRK1Q99986 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.94■□□□□ 0.3
VRK1Q99986 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.94■□□□□ 0.3
VRK1Q99986 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.94■□□□□ 0.3
VRK1Q99986 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VRK1Q99986 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 AC005082.1-201ENST00000413042 2259 ntBASIC16.93■□□□□ 0.3
VRK1Q99986 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.93■□□□□ 0.3
VRK1Q99986 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.93■□□□□ 0.3
VRK1Q99986 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 AC233702.5-201ENST00000584107 538 ntBASIC16.93■□□□□ 0.3
VRK1Q99986 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.93■□□□□ 0.3
VRK1Q99986 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 AC120498.9-201ENST00000339021 3867 ntBASIC16.93■□□□□ 0.3
VRK1Q99986 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.93■□□□□ 0.3
VRK1Q99986 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.93■□□□□ 0.3
VRK1Q99986 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VRK1Q99986 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
VRK1Q99986 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.92■□□□□ 0.3
VRK1Q99986 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.92■□□□□ 0.3
VRK1Q99986 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.92■□□□□ 0.3
VRK1Q99986 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 TSPY7P-201ENST00000431358 1114 ntBASIC16.92■□□□□ 0.3
VRK1Q99986 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
VRK1Q99986 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.92■□□□□ 0.3
VRK1Q99986 AC004264.1-201ENST00000608354 794 ntBASIC16.92■□□□□ 0.3
VRK1Q99986 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 AL049637.2-201ENST00000641778 930 ntBASIC16.92■□□□□ 0.3
VRK1Q99986 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VRK1Q99986 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
VRK1Q99986 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms