Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMOQ99835 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SMOQ99835 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.19■□□□□ 0.82
SMOQ99835 AC145285.6-201ENST00000604632 637 ntBASIC20.19■□□□□ 0.82
SMOQ99835 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
SMOQ99835 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.19■□□□□ 0.82
SMOQ99835 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.19■□□□□ 0.82
SMOQ99835 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.18■□□□□ 0.82
SMOQ99835 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SMOQ99835 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMOQ99835 AC007952.6-201ENST00000573168 2673 ntBASIC20.18■□□□□ 0.82
SMOQ99835 AC003957.1-201ENST00000625108 2673 ntBASIC20.18■□□□□ 0.82
SMOQ99835 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMOQ99835 INGX-201ENST00000359239 846 ntBASIC20.18■□□□□ 0.82
SMOQ99835 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.18■□□□□ 0.82
SMOQ99835 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.18■□□□□ 0.82
SMOQ99835 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.18■□□□□ 0.82
SMOQ99835 PRSS44-201ENST00000515154 1146 ntBASIC20.18■□□□□ 0.82
SMOQ99835 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.18■□□□□ 0.82
SMOQ99835 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.18■□□□□ 0.82
SMOQ99835 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.18■□□□□ 0.82
SMOQ99835 LINC01568-207ENST00000641790 1380 ntBASIC20.18■□□□□ 0.82
SMOQ99835 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMOQ99835 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMOQ99835 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.18■□□□□ 0.82
SMOQ99835 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.18■□□□□ 0.82
SMOQ99835 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMOQ99835 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMOQ99835 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.17■□□□□ 0.82
SMOQ99835 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.17■□□□□ 0.82
SMOQ99835 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.17■□□□□ 0.82
SMOQ99835 TEX21P-204ENST00000641479 1693 ntBASIC20.17■□□□□ 0.82
SMOQ99835 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
SMOQ99835 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.17■□□□□ 0.82
SMOQ99835 TSPY14P-201ENST00000303979 915 ntBASIC20.17■□□□□ 0.82
SMOQ99835 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
SMOQ99835 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.17■□□□□ 0.82
SMOQ99835 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.17■□□□□ 0.82
SMOQ99835 TSPY21P-201ENST00000433481 731 ntBASIC20.17■□□□□ 0.82
SMOQ99835 C2orf69P3-201ENST00000565542 1120 ntBASIC20.17■□□□□ 0.82
SMOQ99835 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
SMOQ99835 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.17■□□□□ 0.82
SMOQ99835 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SMOQ99835 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMOQ99835 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.16■□□□□ 0.82
SMOQ99835 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.16■□□□□ 0.82
SMOQ99835 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.16■□□□□ 0.82
SMOQ99835 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.16■□□□□ 0.82
SMOQ99835 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.16■□□□□ 0.82
SMOQ99835 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMOQ99835 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.16■□□□□ 0.82
SMOQ99835 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SMOQ99835 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
SMOQ99835 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.16■□□□□ 0.82
SMOQ99835 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMOQ99835 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMOQ99835 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMOQ99835 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms