Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
ABCA3Q99758 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 TSPY22P-201ENST00000427496 604 ntBASIC25.66■■□□□ 1.7
ABCA3Q99758 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA3Q99758 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA3Q99758 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.66■■□□□ 1.7
ABCA3Q99758 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.66■■□□□ 1.7
ABCA3Q99758 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
ABCA3Q99758 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
ABCA3Q99758 KRT16P4-201ENST00000453883 522 ntBASIC25.66■■□□□ 1.7
ABCA3Q99758 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.66■■□□□ 1.7
ABCA3Q99758 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.66■■□□□ 1.7
ABCA3Q99758 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.65■■□□□ 1.7
ABCA3Q99758 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC25.65■■□□□ 1.7
ABCA3Q99758 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 AL391807.1-203ENST00000604392 2365 ntBASIC25.65■■□□□ 1.7
ABCA3Q99758 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.65■■□□□ 1.7
ABCA3Q99758 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC25.65■■□□□ 1.7
ABCA3Q99758 AP005212.1-201ENST00000581547 1997 ntBASIC25.65■■□□□ 1.7
ABCA3Q99758 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
ABCA3Q99758 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ABCA3Q99758 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ABCA3Q99758 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC25.64■■□□□ 1.7
ABCA3Q99758 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ABCA3Q99758 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
ABCA3Q99758 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC25.64■■□□□ 1.7
ABCA3Q99758 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
ABCA3Q99758 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ABCA3Q99758 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ABCA3Q99758 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ABCA3Q99758 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.64■■□□□ 1.7
ABCA3Q99758 MIR3180-5-201ENST00000583743 153 ntBASIC25.64■■□□□ 1.7
ABCA3Q99758 TEN1-204ENST00000588202 862 ntTSL 3 BASIC25.64■■□□□ 1.7
ABCA3Q99758 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC25.64■■□□□ 1.7
ABCA3Q99758 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.64■■□□□ 1.69
ABCA3Q99758 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
ABCA3Q99758 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ABCA3Q99758 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
ABCA3Q99758 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
ABCA3Q99758 FOSL1P1-201ENST00000511041 816 ntBASIC25.63■■□□□ 1.69
ABCA3Q99758 AP000867.3-201ENST00000524675 377 ntBASIC25.63■■□□□ 1.69
ABCA3Q99758 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC25.63■■□□□ 1.69
ABCA3Q99758 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC25.63■■□□□ 1.69
ABCA3Q99758 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
ABCA3Q99758 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 PENK-208ENST00000523051 772 ntTSL 5 BASIC25.63■■□□□ 1.69
ABCA3Q99758 AL662844.1-201ENST00000546340 181 ntBASIC25.63■■□□□ 1.69
ABCA3Q99758 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC25.63■■□□□ 1.69
ABCA3Q99758 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ABCA3Q99758 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.62■■□□□ 1.69
ABCA3Q99758 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
ABCA3Q99758 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ABCA3Q99758 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
ABCA3Q99758 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
ABCA3Q99758 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.62■■□□□ 1.69
ABCA3Q99758 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ABCA3Q99758 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
ABCA3Q99758 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC25.62■■□□□ 1.69
ABCA3Q99758 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC25.62■■□□□ 1.69
ABCA3Q99758 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ABCA3Q99758 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ABCA3Q99758 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
ABCA3Q99758 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms