Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RAB40CQ96S21 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAB40CQ96S21 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 AL512353.2-201ENST00000448759 1962 ntBASIC15.59■□□□□ 0.09
RAB40CQ96S21 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 RARRES2P6-201ENST00000567333 442 ntBASIC15.59■□□□□ 0.09
RAB40CQ96S21 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 NTF6G-201ENST00000591094 616 ntBASIC15.59■□□□□ 0.09
RAB40CQ96S21 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC013268.1-206ENST00000638368 961 ntBASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC112229.1-201ENST00000639295 961 ntBASIC15.59■□□□□ 0.09
RAB40CQ96S21 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAB40CQ96S21 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.59■□□□□ 0.09
RAB40CQ96S21 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40CQ96S21 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40CQ96S21 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB40CQ96S21 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB40CQ96S21 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.58■□□□□ 0.09
RAB40CQ96S21 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40CQ96S21 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.58■□□□□ 0.09
RAB40CQ96S21 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RAB40CQ96S21 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAB40CQ96S21 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 AC020916.1-201ENST00000587762 1774 ntBASIC15.58■□□□□ 0.08
RAB40CQ96S21 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 AC026271.2-201ENST00000428091 497 ntBASIC15.58■□□□□ 0.08
RAB40CQ96S21 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAB40CQ96S21 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.58■□□□□ 0.08
RAB40CQ96S21 AC116351.2-201ENST00000606540 1585 ntBASIC15.58■□□□□ 0.08
RAB40CQ96S21 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAB40CQ96S21 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAB40CQ96S21 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms