Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 BX276092.5-203ENST00000456199 560 ntBASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 AP000867.3-201ENST00000524675 377 ntBASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSMD1Q96PZ7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 POLD2P1-201ENST00000511220 997 ntBASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CSMD1Q96PZ7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 TPSP2-201ENST00000561760 610 ntBASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AC018553.1-201ENST00000616682 1458 ntBASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AL162741.1-201ENST00000565563 1558 ntBASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 TOB2P1-201ENST00000469761 992 ntBASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.37■□□□□ 0.21
CSMD1Q96PZ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CSMD1Q96PZ7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms