Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 AC008687.6-201ENST00000596318 630 ntBASIC19.42■□□□□ 0.7
LRRC39Q96DD0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC39Q96DD0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 AC083880.1-201ENST00000608266 535 ntBASIC19.41■□□□□ 0.7
LRRC39Q96DD0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC39Q96DD0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 SOX15-203ENST00000570788 1093 ntBASIC19.4■□□□□ 0.7
LRRC39Q96DD0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 NEFHP1-201ENST00000412845 2629 ntBASIC19.4■□□□□ 0.7
LRRC39Q96DD0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 AC079598.2-202ENST00000546624 1451 ntBASIC19.4■□□□□ 0.7
LRRC39Q96DD0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC39Q96DD0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC39Q96DD0 AL512353.2-201ENST00000448759 1962 ntBASIC19.39■□□□□ 0.7
LRRC39Q96DD0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AL138781.1-201ENST00000566567 1274 ntBASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 AIRN-201ENST00000601203 4374 ntBASIC19.39■□□□□ 0.69
LRRC39Q96DD0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC39Q96DD0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms