Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 AP000867.3-201ENST00000524675 377 ntBASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 AL671883.3-201ENST00000603274 991 ntBASIC20.91■□□□□ 0.94
TRIM43Q96BQ3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 TSPY22P-201ENST00000427496 604 ntBASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 KRT18P31-201ENST00000506277 1292 ntBASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 EP400NL-214ENST00000641289 2402 ntBASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TRIM43Q96BQ3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM43Q96BQ3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM43Q96BQ3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
TRIM43Q96BQ3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM43Q96BQ3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM43Q96BQ3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 MRPL3P1-201ENST00000400109 1033 ntBASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 HLA-F-220ENST00000434407 884 ntBASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 DRAXINP1-201ENST00000437611 948 ntBASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 LINC00265-3P-201ENST00000447588 903 ntBASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM43Q96BQ3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM43Q96BQ3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM43Q96BQ3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 GPAT2P1-201ENST00000444924 1672 ntBASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
TRIM43Q96BQ3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms