Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 FAM197Y1-201ENST00000421178 764 ntBASIC20.69■□□□□ 0.9
SEMA4DQ92854 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 KRT16P1-201ENST00000399124 1418 ntBASIC20.69■□□□□ 0.9
SEMA4DQ92854 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 TSPY23P-201ENST00000440136 739 ntBASIC20.68■□□□□ 0.9
SEMA4DQ92854 AC008040.2-201ENST00000461049 708 ntBASIC20.68■□□□□ 0.9
SEMA4DQ92854 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 AC131212.4-201ENST00000623606 975 ntBASIC20.68■□□□□ 0.9
SEMA4DQ92854 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 IRX1P1-201ENST00000438849 1838 ntBASIC20.68■□□□□ 0.9
SEMA4DQ92854 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 AC018445.3-201ENST00000624177 1945 ntBASIC20.68■□□□□ 0.9
SEMA4DQ92854 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SEMA4DQ92854 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEMA4DQ92854 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 AC233702.5-201ENST00000584107 538 ntBASIC20.67■□□□□ 0.9
SEMA4DQ92854 AC113410.3-201ENST00000623366 203 ntBASIC20.67■□□□□ 0.9
SEMA4DQ92854 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SEMA4DQ92854 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.67■□□□□ 0.9
SEMA4DQ92854 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 AC011506.1-201ENST00000474329 610 ntBASIC20.66■□□□□ 0.9
SEMA4DQ92854 CD177P1-201ENST00000606252 935 ntBASIC20.66■□□□□ 0.9
SEMA4DQ92854 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 FP475955.4-201ENST00000623131 1990 ntBASIC20.66■□□□□ 0.9
SEMA4DQ92854 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SEMA4DQ92854 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA4DQ92854 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA4DQ92854 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.65■□□□□ 0.9
SEMA4DQ92854 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA4DQ92854 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms